myRT

myRT report for GCA_008388725.1_ASM838872v1

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Seq: RDTY01000121.1 Escherichia coli strain EC345_ST10C scaffold_120, whole genome shotgun sequence (2192 bp)
Overview 1 RT 1: 93-2189 bp Neighborhood of RT #1 [93, 2189] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1830-2189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RDTY01000036.1 Escherichia coli strain EC345_ST10C scaffold_35, whole genome shotgun sequence (46321 bp)
Overview 1 RT 1: 22100-26455 bp Neighborhood of RT #1 [22100, 26478] HTH_XRE RVT-Retrons PRK13889 TraD Feature: gene Location: 22100-22315 bp Feature: gene Location: 22406-22687 bp Feature: domain Description: HTH_XRE Location: 22421-22586 bp Feature: domain Description: HTH_XRE Location: 2 2 42 1-2 2 586 bp Feature: gene Location: 22680-23780 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22821-23373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 82 1-2 3373 bp Feature: gene Location: 23857-25359 bp Feature: domain Description: PRK13889 Location: 23860-24439 bp Feature: domain Description: PRK13889 Location: 2 3860-2 4439 bp Feature: gene Location: 26167-26478 bp Feature: domain Description: TraD Location: 26281-26455 bp Feature: domain Description: TraD Location: 2 62 81-2 6455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional), TraD (pfam06412)