myRT

myRT report for GCA_008388815.1_ASM838881v1

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Seq: RDUE01000020.1 Escherichia coli strain EC302_ST349 scaffold_19, whole genome shotgun sequence (125929 bp)
Overview 1 RT 1: 105953-111290 bp Neighborhood of RT #1 [105953, 111298] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Feature: gene Location: 105953-106870 bp Feature: domain Description: PFLE_PFLC Location: 105989-106844 bp Feature: domain Description: PFLE_PFLC Location: 1 05989-1 06844 bp Feature: gene Location: 107007-107912 bp Feature: gene Location: 108398-108937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108728-108806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08728-1 08806 bp Feature: gene Location: 108965-109486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108971-109253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08971 -1 09253 bp Feature: domain Description: GIIM Note: maturase Location: 109301-109481 bp Feature: domain Description: GIIM Note: maturase Location: 1 09301 -1 09481 bp Feature: gene Location: 109808-109996 bp Feature: gene Location: 110036-111298 bp Feature: domain Description: YesM Location: 110549-111290 bp Feature: domain Description: YesM Location: 1 1 0549-1 1 1 290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: RDUE01000025.1 Escherichia coli strain EC302_ST349 scaffold_24, whole genome shotgun sequence (67691 bp)
Overview 1 RT 1: 34141-39044 bp Neighborhood of RT #1 [34141, 39052] RVT-Retrons HTH_1 PBP2_CrgA_like_5 Feature: gene Location: 34141-34335 bp Feature: gene Location: 34618-35586 bp Feature: gene Location: 35573-36505 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35675-36266 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35675-362 66 bp Feature: gene Location: 37099-37641 bp Feature: gene Location: 38168-39052 bp Feature: domain Description: HTH_1 Location: 38192-38366 bp Feature: domain Description: HTH_1 Location: 38192 -38366 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 38447-39044 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 38447-39044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_1 (pfam00126), PBP2_CrgA_like_5 (cd08474)