myRT

myRT report for GCA_008421245.1_ASM842124v1

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Seq: VVNE01000055.1 Alistipes indistinctus strain BIOML-A1 scaffold398_size1910, whole genome shotgun sequence (1910 bp)
Overview 1 RT 1: 107-1907 bp Neighborhood of RT #1 [107, 1907] RVT-GII GIIM Feature: gene Location: 107-1498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434-1 058 bp Feature: domain Description: GIIM Note: maturase Location: 1121-1331 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 21 -1 331 bp Feature: gene Location: 1728-1907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VVNE01000056.1 Alistipes indistinctus strain BIOML-A1 scaffold399_size1884, whole genome shotgun sequence (1884 bp)
Overview 1 RT 1: 63-1230 bp Neighborhood of RT #1 [63, 1394] RVT-GII GIIM Feature: gene Location: 63-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 85-912 bp Feature: domain Description: GIIM Note: maturase Location: 999-1230 bp Feature: domain Description: GIIM Note: maturase Location: 999-12 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VVNE01000021.1 Alistipes indistinctus strain BIOML-A1 scaffold96_size10076, whole genome shotgun sequence (10076 bp)
Overview 1 RT 1: 7987-9803 bp Neighborhood of RT #1 [7987, 9970] RVT-GII GIIM Feature: gene Location: 7987-8214 bp Feature: gene Location: 8247-8579 bp Feature: gene Location: 8867-9970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8951-9530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8951-953 0 bp Feature: domain Description: GIIM Note: maturase Location: 9593-9803 bp Feature: domain Description: GIIM Note: maturase Location: 9593 -9803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VVNE01000023.1 Alistipes indistinctus strain BIOML-A1 scaffold99_size14989, whole genome shotgun sequence (14989 bp)
Overview 1 RT 1: 2-2974 bp Neighborhood of RT #1 [2, 3072] RVT-Retrons AAA_23 HTH_29 DDE_3 Feature: gene Location: 2-169 bp Feature: gene Location: 561-1451 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 627-1218 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 627-1218 bp Feature: gene Location: 1453-1839 bp Feature: domain Description: AAA_23 Location: 1591-1810 bp Feature: domain Description: AAA_23 Location: 1591-1810 bp Feature: gene Location: 1897-3072 bp Feature: domain Description: HTH_29 Location: 2005-2185 bp Feature: domain Description: HTH_29 Location: 2005-2185 bp Feature: domain Description: DDE_3 Location: 2536-2974 bp Feature: domain Description: DDE_3 Location: 2536-2974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), HTH_29 (pfam13551), DDE_3 (pfam13358), RVT-Retrons