myRT

myRT report for GCA_008501925.1_ASM850192v1

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Seq: QRFE01000010.1 Agrobacterium tumefaciens strain SBV_38 Scaffold10, whole genome shotgun sequence (219514 bp)
Overview 1 RT 1: 37877-41139 bp 2 RT 2: 176067-187148 bp Neighborhood of RT #1 [37877, 41139] RVT-Retrons InsE Neighborhood of RT #2 [176067, 187231] LysR COG1708 HEPN dnaG RVT-UG10 RVT-UG10 Type_ISP_C Feature: gene Location: 37877-38155 bp Feature: gene Location: 38356-38502 bp Feature: gene Location: 38547-40298 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38685-39309 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38685-39309 bp Feature: gene Location: 40563-40886 bp Feature: domain Description: InsE Location: 40572-40866 bp Feature: domain Description: InsE Location: 40572-40866 bp Feature: gene Location: 40966-41139 bp Feature: gene Location: 176067-176987 bp Feature: domain Description: LysR Location: 176070-176895 bp Feature: domain Description: LysR Location: 1 76070-1 76895 bp Feature: gene Location: 177102-178151 bp Feature: domain Description: COG1708 Location: 177291-177654 bp Feature: domain Description: COG1 708 Location: 1 77291 -1 77654 bp Feature: domain Description: HEPN Location: 177741-178068 bp Feature: domain Description: HEPN Location: 1 77741 -1 78068 bp Feature: gene Location: 178391-185896 bp Feature: domain Description: dnaG Location: 178415-179591 bp Feature: domain Description: dnaG Location: 1 7841 5-1 79591 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 180212-180434 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 1 8021 2-1 80434 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 180626-180890 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 1 80626-1 80890 bp Feature: gene Location: 186068-186661 bp Feature: gene Location: 186833-187231 bp Feature: domain Description: Type_ISP_C Location: 186836-187148 bp Feature: domain Description: Type_ISP_C Location: 1 86836-1 871 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, InsE (COG2963), LysR (COG0583), COG1708 (Predicted nucleotidyltransferase ), HEPN (smart00748), dnaG (TIGR01391), RVT-UG10, Type_ISP_C (pfam18135)