myRT

myRT report for GCA_008565155.1_ASM856515v1

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Seq: VWMX01000079.1 Bacteroides salyersiae strain BIOML-A26 scaffold79_size16601, whole genome shotgun sequence (16601 bp)
Overview 1 RT 1: 1-9607 bp Neighborhood of RT #1 [1, 9607] CotH LRR_AMN1 RVT-DGRs Feature: gene Location: 1-6820 bp Feature: domain Description: CotH Location: 3094-3985 bp Feature: domain Description: CotH Location: 3094-3985 bp Feature: domain Description: LRR_AMN1 Location: 4615-5041 bp Feature: domain Description: LRR_AMN1 Location: 461 5-5041 bp Feature: gene Location: 6945-7133 bp Feature: gene Location: 7325-8626 bp Ori: KAA3710356.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7538-8135 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7538-81 35 bp Feature: gene Location: 8626-9108 bp Feature: gene Location: 9317-9607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs

Seq: VWMX01000005.1 Bacteroides salyersiae strain BIOML-A26 scaffold5_size91166, whole genome shotgun sequence (91166 bp)
Overview 1 RT 1: 42600-53946 bp Neighborhood of RT #1 [42600, 53984] Laminin_G_3 CotH LRR_AMN1 RVT-DGRs Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 42600-43766 bp Feature: gene Location: 43776-50564 bp Ori: KAA3716738.1 Feature: domain Description: Laminin_G_3 Location: 46212-46593 bp Feature: domain Description: Laminin_G_3 Location: 462 12 -46593 bp Feature: domain Description: CotH Location: 46854-47796 bp Feature: domain Description: CotH Location: 46854-47796 bp Feature: domain Description: LRR_AMN1 Location: 48321-48768 bp Feature: domain Description: LRR_AMN1 Location: 4832 1-48768 bp Feature: gene Location: 50998-52293 bp Ori: KAA3716739.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51214-51805 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 512 14-51805 bp Feature: gene Location: 52295-52789 bp Feature: gene Location: 52839-53984 bp Ori: KAA3716741.1 Feature: domain Description: Arm-DNA-bind_5 Location: 52863-53109 bp Feature: domain Description: Arm-DNA-bind_5 Location: 52 863-53109 bp Feature: domain Description: Phage_int_SAM_5 Location: 53148-53433 bp Feature: domain Description: Phage_int_SAM_5 Location: 53148-53433 bp Feature: domain Description: INTN1_C_like Location: 53472-53946 bp Feature: domain Description: INTN1_C_like Location: 53472 -53946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: VWMX01000001.1 Bacteroides salyersiae strain BIOML-A26 scaffold1_size105149, whole genome shotgun sequence (105149 bp)
Overview 1 RT 1: 46274-52511 bp Neighborhood of RT #1 [46274, 52777] TraG-D_C RVT_N RVT-GII GIIM YWFCY Relaxase Relaxase Feature: gene Location: 46274-46669 bp Feature: gene Location: 46785-47990 bp Ori: KAA3717356.1 Feature: domain Description: TraG-D_C Location: 47367-47700 bp Feature: domain Description: TraG-D_C Location: 473 67-47700 bp Feature: gene Location: 47995-49647 bp Ori: KAA3717357.1 Gene: ltrA Feature: domain Description: RVT_N Location: 48049-48292 bp Feature: domain Description: RVT_N Location: 48049-48292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48337-48985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483 3 7-48985 bp Feature: domain Description: GIIM Note: maturase Location: 49039-49270 bp Feature: domain Description: GIIM Note: maturase Location: 4903 9-49270 bp Feature: gene Location: 50284-51207 bp Ori: KAA3717358.1 Feature: domain Description: YWFCY Location: 50290-50467 bp Feature: domain Description: YWFCY Location: 50290-50467 bp Feature: gene Location: 51482-52777 bp Ori: KAA3717359.1 Feature: domain Description: Relaxase Location: 51659-51950 bp Feature: domain Description: Relaxase Location: 51659-51950 bp Feature: domain Description: Relaxase Location: 52259-52511 bp Feature: domain Description: Relaxase Location: 52259-52511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), YWFCY (pfam14293), Relaxase (pfam03432)

Seq: VWMX01000031.1 Bacteroides salyersiae strain BIOML-A26 scaffold31_size29682, whole genome shotgun sequence (29682 bp)
Overview 1 RT 1: 21963-26817 bp Neighborhood of RT #1 [21963, 26817] RVT-UG27 Feature: gene Location: 21963-23057 bp Feature: gene Location: 23079-23540 bp Feature: gene Location: 24572-25837 bp Ori: KAA3713430.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 24761-25397 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 24 761-25397 bp Feature: gene Location: 25827-26228 bp Feature: gene Location: 26215-26817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: VWMX01000115.1 Bacteroides salyersiae strain BIOML-A26 scaffold115_size10233, whole genome shotgun sequence (10233 bp)
Overview 1 RT 1: 1435-5685 bp Neighborhood of RT #1 [1435, 5685] RVT-DGRs Feature: gene Location: 1435-1749 bp Feature: gene Location: 1751-2140 bp Feature: gene Location: 2115-3161 bp Ori: KAA3709103.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2322-2949 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2322-2949 bp Feature: gene Location: 3460-4887 bp Feature: gene Location: 4924-5685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VWMX01000227.1 Bacteroides salyersiae strain BIOML-A26 scaffold227_size5691, whole genome shotgun sequence (5691 bp)
Overview 1 RT 1: 1381-4856 bp Neighborhood of RT #1 [1381, 4894] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Feature: gene Location: 1381-1803 bp Ori: KAA3706115.1 Feature: domain Description: Cas_Cmr5 Location: 1453-1780 bp Feature: domain Description: Cas_Cmr5 Location: 1453-1780 bp Feature: gene Location: 1800-2588 bp Ori: KAA3706116.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 1881-2577 bp Feature: domain Description: Cmr6 _III-B Location: 1881-2577 bp Feature: gene Location: 2621-4894 bp Ori: KAA3706117.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2831-3434 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2831-3434 bp Feature: domain Description: Cas1_I-II-III Location: 3896-4856 bp Feature: domain Description: Cas1_I-II-III Location: 3896 -4856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656)