myRT

myRT report for GCA_008565165.1_ASM856516v1

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Seq: VWMV01000036.1 Bacteroides salyersiae strain BIOML-A22 scaffold36_size56883, whole genome shotgun sequence (56883 bp)
Overview 1 RT 1: 34297-37787 bp Neighborhood of RT #1 [34297, 37810] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 34297-36570 bp Ori: KAA3688955.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 34507-35110 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 34507-351 1 0 bp Feature: domain Description: Cas1_I-II-III Location: 35572-36532 bp Feature: domain Description: Cas1 _I-II-III Location: 35572-36532 bp Feature: gene Location: 36603-37391 bp Ori: KAA3688956.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 36684-37380 bp Feature: domain Description: Cmr6_III-B Location: 36684-37380 bp Feature: gene Location: 37388-37810 bp Ori: KAA3688957.1 Feature: domain Description: Cas_Cmr5 Location: 37460-37787 bp Feature: domain Description: Cas_Cmr5 Location: 37460-37787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: VWMV01000009.1 Bacteroides salyersiae strain BIOML-A22 scaffold9_size189653, whole genome shotgun sequence (189653 bp)
Overview 1 RT 1: 16229-19681 bp Neighborhood of RT #1 [16229, 19681] RVT-DGRs Feature: gene Location: 16229-16543 bp Feature: gene Location: 16545-16934 bp Feature: gene Location: 16909-17955 bp Ori: KAA3692430.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17116-17743 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17116-17743 bp Feature: gene Location: 18016-18210 bp Feature: gene Location: 18254-19681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VWMV01000004.1 Bacteroides salyersiae strain BIOML-A22 scaffold4_size263575, whole genome shotgun sequence (263575 bp)
Overview 1 RT 1: 161344-169915 bp Neighborhood of RT #1 [161344, 171696] RVT-DGRs CotH LRR_AMN1 Feature: gene Location: 161344-161634 bp Feature: gene Location: 161843-162325 bp Feature: gene Location: 162325-163626 bp Ori: KAA3693875.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 162538-163135 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16253 8-163 13 5 bp Feature: gene Location: 163818-164006 bp Feature: gene Location: 164131-171696 bp Ori: KAA3693876.1 Feature: domain Description: CotH Location: 167968-168856 bp Feature: domain Description: CotH Location: 167968-168856 bp Feature: domain Description: LRR_AMN1 Location: 169489-169915 bp Feature: domain Description: LRR_AMN1 Location: 169489-169915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, CotH (pfam08757), LRR_AMN1 (sd00034)

Seq: VWMV01000002.1 Bacteroides salyersiae strain BIOML-A22 scaffold2_size296137, whole genome shotgun sequence (296137 bp)
Overview 1 RT 1: 281513-286367 bp Neighborhood of RT #1 [281513, 286367] RVT-UG27 Feature: gene Location: 281513-282607 bp Feature: gene Location: 282629-283090 bp Feature: gene Location: 284122-285387 bp Ori: KAA3694881.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 284311-284947 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 284 311-284 94 7 bp Feature: gene Location: 285377-285778 bp Feature: gene Location: 285765-286367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: VWMV01000005.1 Bacteroides salyersiae strain BIOML-A22 scaffold5_size231275, whole genome shotgun sequence (231275 bp)
Overview 1 RT 1: 95633-107017 bp Neighborhood of RT #1 [95633, 107017] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 CotH LRR_AMN1 Feature: gene Location: 95633-96778 bp Ori: KAA3693500.1 Feature: domain Description: Arm-DNA-bind_5 Location: 95657-95903 bp Feature: domain Description: Arm-DNA-bind_5 Location: 95 65 7-95 903 bp Feature: domain Description: Phage_int_SAM_5 Location: 95942-96227 bp Feature: domain Description: Phage_int_SAM_5 Location: 95 942-96227 bp Feature: domain Description: INTN1_C_like Location: 96266-96740 bp Feature: domain Description: INTN1_C_like Location: 96266-96740 bp Feature: gene Location: 96828-97322 bp Feature: gene Location: 97324-98619 bp Ori: KAA3693502.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97540-98131 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 975 40-98131 bp Feature: gene Location: 99053-105841 bp Ori: KAA3693503.1 Feature: domain Description: Laminin_G_3 Location: 101489-101870 bp Feature: domain Description: Laminin_G_3 Location: 101489-101870 bp Feature: domain Description: CotH Location: 102131-103073 bp Feature: domain Description: CotH Location: 102131-103073 bp Feature: domain Description: LRR_AMN1 Location: 103598-104045 bp Feature: domain Description: LRR_AMN1 Location: 1035 98-104045 bp Feature: gene Location: 105851-107017 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs, Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034)

Seq: VWMV01000010.1 Bacteroides salyersiae strain BIOML-A22 scaffold10_size178672, whole genome shotgun sequence (178672 bp)
Overview 1 RT 1: 119796-126033 bp Neighborhood of RT #1 [119796, 126299] TraG-D_C RVT_N RVT-GII GIIM YWFCY Relaxase Relaxase Feature: gene Location: 119796-120191 bp Feature: gene Location: 120307-121512 bp Ori: KAA3692281.1 Feature: domain Description: TraG-D_C Location: 120889-121222 bp Feature: domain Description: TraG-D_C Location: 120889-121222 bp Feature: gene Location: 121517-123169 bp Ori: KAA3692282.1 Gene: ltrA Feature: domain Description: RVT_N Location: 121571-121814 bp Feature: domain Description: RVT_N Location: 121571-121814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121859-122507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121859-122507 bp Feature: domain Description: GIIM Note: maturase Location: 122561-122792 bp Feature: domain Description: GIIM Note: maturase Location: 12256 1-122792 bp Feature: gene Location: 123806-124729 bp Ori: KAA3692283.1 Feature: domain Description: YWFCY Location: 123812-123989 bp Feature: domain Description: YWFCY Location: 123812-123989 bp Feature: gene Location: 125004-126299 bp Ori: KAA3692284.1 Feature: domain Description: Relaxase Location: 125181-125472 bp Feature: domain Description: Relaxase Location: 125181-125472 bp Feature: domain Description: Relaxase Location: 125781-126033 bp Feature: domain Description: Relaxase Location: 125781-126 033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), YWFCY (pfam14293), Relaxase (pfam03432)