myRT

myRT report for GCA_008565185.1_ASM856518v1

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Seq: VWMW01000004.1 Bacteroides salyersiae strain BIOML-A24 scaffold4_size178674, whole genome shotgun sequence (178674 bp)
Overview 1 RT 1: 52376-58879 bp Neighborhood of RT #1 [52376, 58879] Relaxase Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 52376-53671 bp Ori: KAA3699396.1 Feature: domain Description: Relaxase Location: 52553-52844 bp Feature: domain Description: Relaxase Location: 52553-52844 bp Feature: domain Description: Relaxase Location: 53153-53405 bp Feature: domain Description: Relaxase Location: 531 53-53405 bp Feature: gene Location: 53946-54869 bp Ori: KAA3699397.1 Feature: domain Description: YWFCY Location: 53952-54129 bp Feature: domain Description: YWFCY Location: 53952-541 29 bp Feature: gene Location: 55506-57158 bp Ori: KAA3699398.1 Gene: ltrA Feature: domain Description: RVT_N Location: 55560-55803 bp Feature: domain Description: RVT_N Location: 55560-55803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55848-56496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55848-56496 bp Feature: domain Description: GIIM Note: maturase Location: 56550-56781 bp Feature: domain Description: GIIM Note: maturase Location: 56550-56781 bp Feature: gene Location: 57163-58368 bp Ori: KAA3699399.1 Feature: domain Description: TraG-D_C Location: 57745-58078 bp Feature: domain Description: TraG-D_C Location: 57745-58078 bp Feature: gene Location: 58484-58879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)

Seq: VWMW01000062.1 Bacteroides salyersiae strain BIOML-A24 scaffold62_size22991, whole genome shotgun sequence (22991 bp)
Overview 1 RT 1: 299-3789 bp Neighborhood of RT #1 [299, 3812] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 299-2572 bp Ori: KAA3692369.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 509-1112 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 509-1112 bp Feature: domain Description: Cas1_I-II-III Location: 1574-2534 bp Feature: domain Description: Cas1_I-II-III Location: 1574-2 534 bp Feature: gene Location: 2605-3393 bp Ori: KAA3692370.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 2686-3382 bp Feature: domain Description: Cmr6_III-B Location: 2 686-3382 bp Feature: gene Location: 3390-3812 bp Ori: KAA3692371.1 Feature: domain Description: Cas_Cmr5 Location: 3462-3789 bp Feature: domain Description: Cas_Cmr5 Location: 3462 -3789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: VWMW01000059.1 Bacteroides salyersiae strain BIOML-A24 scaffold59_size24749, whole genome shotgun sequence (24749 bp)
Overview 1 RT 1: 4794-15146 bp Neighborhood of RT #1 [4794, 15146] CotH LRR_AMN1 RVT-DGRs Feature: gene Location: 4794-12359 bp Ori: KAA3692606.1 Feature: domain Description: CotH Location: 8631-9519 bp Feature: domain Description: CotH Location: 863 1-9519 bp Feature: domain Description: LRR_AMN1 Location: 10152-10578 bp Feature: domain Description: LRR_AMN1 Location: 10152-10578 bp Feature: gene Location: 12484-12672 bp Feature: gene Location: 12864-14165 bp Ori: KAA3692607.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13077-13674 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13 077-13 674 bp Feature: gene Location: 14165-14647 bp Feature: gene Location: 14856-15146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs

Seq: VWMW01000010.1 Bacteroides salyersiae strain BIOML-A24 scaffold10_size135033, whole genome shotgun sequence (135033 bp)
Overview 1 RT 1: 8293-13147 bp Neighborhood of RT #1 [8293, 13147] RVT-UG27 Feature: gene Location: 8293-8895 bp Feature: gene Location: 8882-9283 bp Feature: gene Location: 9273-10538 bp Ori: KAA3698064.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 9462-10098 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 94 62-10098 bp Feature: gene Location: 11570-12031 bp Feature: gene Location: 12053-13147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: VWMW01000008.1 Bacteroides salyersiae strain BIOML-A24 scaffold8_size149692, whole genome shotgun sequence (149692 bp)
Overview 1 RT 1: 42582-53928 bp Neighborhood of RT #1 [42582, 53966] Laminin_G_3 CotH LRR_AMN1 RVT-DGRs Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 42582-43748 bp Feature: gene Location: 43758-50546 bp Ori: KAA3698554.1 Feature: domain Description: Laminin_G_3 Location: 46194-46575 bp Feature: domain Description: Laminin_G_3 Location: 46194-465 75 bp Feature: domain Description: CotH Location: 46836-47778 bp Feature: domain Description: CotH Location: 46836-47778 bp Feature: domain Description: LRR_AMN1 Location: 48303-48750 bp Feature: domain Description: LRR_AMN1 Location: 48303-4875 0 bp Feature: gene Location: 50980-52275 bp Ori: KAA3698555.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51196-51787 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 1196-5 1787 bp Feature: gene Location: 52277-52771 bp Feature: gene Location: 52821-53966 bp Ori: KAA3698557.1 Feature: domain Description: Arm-DNA-bind_5 Location: 52845-53091 bp Feature: domain Description: Arm-DNA-bind_5 Location: 5 2845 -5 3091 bp Feature: domain Description: Phage_int_SAM_5 Location: 53130-53415 bp Feature: domain Description: Phage_int_SAM_5 Location: 5 3130-5 3415 bp Feature: domain Description: INTN1_C_like Location: 53454-53928 bp Feature: domain Description: INTN1_C_like Location: 5 345 4-5 3928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: VWMW01000005.1 Bacteroides salyersiae strain BIOML-A24 scaffold5_size178011, whole genome shotgun sequence (178011 bp)
Overview 1 RT 1: 4552-8802 bp Neighborhood of RT #1 [4552, 8802] RVT-DGRs Feature: gene Location: 4552-4866 bp Feature: gene Location: 4868-5257 bp Feature: gene Location: 5232-6278 bp Ori: KAA3699085.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5439-6066 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5439-6 06 6 bp Feature: gene Location: 6577-8004 bp Feature: gene Location: 8041-8802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs