myRT

myRT report for GCA_008565195.1_ASM856519v1

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Seq: VWMT01000105.1 Bacteroides salyersiae strain BIOML-A20 scaffold105_size11244, whole genome shotgun sequence (11244 bp)
Overview 1 RT 1: 1-9233 bp Neighborhood of RT #1 [1, 9233] RVT-DGRs Feature: gene Location: 1-6446 bp Feature: gene Location: 6571-6759 bp Feature: gene Location: 6951-8252 bp Ori: KAA3694959.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7164-7761 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 71 64-7761 bp Feature: gene Location: 8252-8734 bp Feature: gene Location: 8943-9233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VWMT01000120.1 Bacteroides salyersiae strain BIOML-A20 scaffold120_size8407, whole genome shotgun sequence (8407 bp)
Overview 1 RT 1: 227-5081 bp Neighborhood of RT #1 [227, 5081] RVT-UG27 Feature: gene Location: 227-1321 bp Feature: gene Location: 1343-1804 bp Feature: gene Location: 2836-4101 bp Ori: KAA3693709.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 3025-3661 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 302 5-3661 bp Feature: gene Location: 4091-4492 bp Feature: gene Location: 4479-5081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: VWMT01000274.1 Bacteroides salyersiae strain BIOML-A20 scaffold274_size2116, whole genome shotgun sequence (2116 bp)
Overview 1 RT 1: 1-2105 bp Neighborhood of RT #1 [1, 2116] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Feature: gene Location: 1-1646 bp Ori: KAA3691424.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 211-814 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 211-814 bp Feature: domain Description: Cas1_I-II-III Location: 1276-1639 bp Feature: domain Description: Cas1_I-II-III Location: 1276-163 9 bp Feature: gene Location: 1679-2116 bp Ori: KAA3691425.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 1715-2105 bp Feature: domain Description: Cmr6_III-B Location: 1715-2105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661)

Seq: VWMT01000004.1 Bacteroides salyersiae strain BIOML-A20 scaffold4_size126982, whole genome shotgun sequence (126982 bp)
Overview 1 RT 1: 72988-84372 bp Neighborhood of RT #1 [72988, 84372] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 CotH LRR_AMN1 Feature: gene Location: 72988-74133 bp Ori: KAA3701636.1 Feature: domain Description: Arm-DNA-bind_5 Location: 73012-73258 bp Feature: domain Description: Arm-DNA-bind_5 Location: 73012-73258 bp Feature: domain Description: Phage_int_SAM_5 Location: 73297-73582 bp Feature: domain Description: Phage_int_SAM_5 Location: 73297-73582 bp Feature: domain Description: INTN1_C_like Location: 73621-74095 bp Feature: domain Description: INTN1_C_like Location: 73621-74 095 bp Feature: gene Location: 74183-74677 bp Feature: gene Location: 74679-75974 bp Ori: KAA3701638.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 74895-75486 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 74 895-754 86 bp Feature: gene Location: 76408-83196 bp Ori: KAA3701639.1 Feature: domain Description: Laminin_G_3 Location: 78844-79225 bp Feature: domain Description: Laminin_G_3 Location: 7884 4 -79225 bp Feature: domain Description: CotH Location: 79486-80428 bp Feature: domain Description: CotH Location: 794 86-804 28 bp Feature: domain Description: LRR_AMN1 Location: 80953-81400 bp Feature: domain Description: LRR_AMN1 Location: 80953-814 00 bp Feature: gene Location: 83206-84372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs, Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034)

Seq: VWMT01000014.1 Bacteroides salyersiae strain BIOML-A20 scaffold14_size65790, whole genome shotgun sequence (65790 bp)
Overview 1 RT 1: 52319-58822 bp Neighborhood of RT #1 [52319, 58822] Relaxase Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 52319-53614 bp Ori: KAA3700864.1 Feature: domain Description: Relaxase Location: 52496-52787 bp Feature: domain Description: Relaxase Location: 5 2496-5 2787 bp Feature: domain Description: Relaxase Location: 53096-53348 bp Feature: domain Description: Relaxase Location: 5 3096-5 3348 bp Feature: gene Location: 53889-54812 bp Ori: KAA3700865.1 Feature: domain Description: YWFCY Location: 53895-54072 bp Feature: domain Description: YWFCY Location: 5 3895 -5 4072 bp Feature: gene Location: 55449-57101 bp Ori: KAA3700866.1 Gene: ltrA Feature: domain Description: RVT_N Location: 55503-55746 bp Feature: domain Description: RVT_N Location: 5 5 5 03-5 5 746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55791-56439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 5 791-5 6439 bp Feature: domain Description: GIIM Note: maturase Location: 56493-56724 bp Feature: domain Description: GIIM Note: maturase Location: 5 6493-5 6724 bp Feature: gene Location: 57106-58311 bp Ori: KAA3700867.1 Feature: domain Description: TraG-D_C Location: 57688-58021 bp Feature: domain Description: TraG-D_C Location: 5 7688-5 8021 bp Feature: gene Location: 58427-58822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)