myRT

myRT report for GCA_008565275.1_ASM856527v1

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Seq: VWMS01000001.1 Bacteroides salyersiae strain BIOML-A19 scaffold1_size231198, whole genome shotgun sequence (231198 bp)
Overview 1 RT 1: 95633-107017 bp Neighborhood of RT #1 [95633, 107017] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 CotH LRR_AMN1 Feature: gene Location: 95633-96778 bp Ori: KAA3708500.1 Feature: domain Description: Arm-DNA-bind_5 Location: 95657-95903 bp Feature: domain Description: Arm-DNA-bind_5 Location: 95657-95903 bp Feature: domain Description: Phage_int_SAM_5 Location: 95942-96227 bp Feature: domain Description: Phage_int_SAM_5 Location: 95942-96227 bp Feature: domain Description: INTN1_C_like Location: 96266-96740 bp Feature: domain Description: INTN1 _C_like Location: 96266-96740 bp Feature: gene Location: 96828-97322 bp Feature: gene Location: 97324-98619 bp Ori: KAA3708502.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97540-98131 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97540-981 31 bp Feature: gene Location: 99053-105841 bp Ori: KAA3708503.1 Feature: domain Description: Laminin_G_3 Location: 101489-101870 bp Feature: domain Description: Laminin_G_3 Location: 1 01 489-1 01 870 bp Feature: domain Description: CotH Location: 102131-103073 bp Feature: domain Description: CotH Location: 1 021 31 -1 03073 bp Feature: domain Description: LRR_AMN1 Location: 103598-104045 bp Feature: domain Description: LRR_AMN1 Location: 1 03598-1 04045 bp Feature: gene Location: 105851-107017 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs, Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034)

Seq: VWMS01000019.1 Bacteroides salyersiae strain BIOML-A19 scaffold19_size67121, whole genome shotgun sequence (67121 bp)
Overview 1 RT 1: 52374-58877 bp Neighborhood of RT #1 [52374, 58877] Relaxase Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 52374-53669 bp Ori: KAA3706545.1 Feature: domain Description: Relaxase Location: 52551-52842 bp Feature: domain Description: Relaxase Location: 52 551-52 842 bp Feature: domain Description: Relaxase Location: 53151-53403 bp Feature: domain Description: Relaxase Location: 53151-53403 bp Feature: gene Location: 53944-54867 bp Ori: KAA3706546.1 Feature: domain Description: YWFCY Location: 53950-54127 bp Feature: domain Description: YWFCY Location: 53950-5412 7 bp Feature: gene Location: 55504-57156 bp Ori: KAA3706547.1 Gene: ltrA Feature: domain Description: RVT_N Location: 55558-55801 bp Feature: domain Description: RVT_N Location: 55558-55801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55846-56494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55846-56494 bp Feature: domain Description: GIIM Note: maturase Location: 56548-56779 bp Feature: domain Description: GIIM Note: maturase Location: 56548-56779 bp Feature: gene Location: 57161-58366 bp Ori: KAA3706548.1 Feature: domain Description: TraG-D_C Location: 57743-58076 bp Feature: domain Description: TraG-D_C Location: 57743-58076 bp Feature: gene Location: 58482-58877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)

Seq: VWMS01000098.1 Bacteroides salyersiae strain BIOML-A19 scaffold98_size11676, whole genome shotgun sequence (11676 bp)
Overview 1 RT 1: 2173-9895 bp Neighborhood of RT #1 [2173, 11676] RVT-DGRs CotH LRR_AMN1 Feature: gene Location: 2173-2463 bp Feature: gene Location: 2672-3154 bp Feature: gene Location: 3154-4455 bp Ori: KAA3703812.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3367-3964 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 3 67-3 964 bp Feature: gene Location: 4647-4835 bp Feature: gene Location: 4960-11676 bp Feature: domain Description: CotH Location: 7948-8839 bp Feature: domain Description: CotH Location: 7948-883 9 bp Feature: domain Description: LRR_AMN1 Location: 9466-9895 bp Feature: domain Description: LRR_AMN1 Location: 9466-9895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, CotH (pfam08757), LRR_AMN1 (sd00034)

Seq: VWMS01000073.1 Bacteroides salyersiae strain BIOML-A19 scaffold73_size19129, whole genome shotgun sequence (19129 bp)
Overview 1 RT 1: 12826-17680 bp Neighborhood of RT #1 [12826, 17680] RVT-UG27 Feature: gene Location: 12826-13920 bp Feature: gene Location: 13942-14403 bp Feature: gene Location: 15435-16700 bp Ori: KAA3704245.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 15624-16260 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 15624 -16260 bp Feature: gene Location: 16690-17091 bp Feature: gene Location: 17078-17680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: VWMS01000138.1 Bacteroides salyersiae strain BIOML-A19 scaffold138_size5923, whole genome shotgun sequence (5923 bp)
Overview 1 RT 1: 3732-5785 bp Neighborhood of RT #1 [3732, 5923] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Feature: gene Location: 3732-4154 bp Ori: KAA3703403.1 Feature: domain Description: Cas_Cmr5 Location: 3804-4131 bp Feature: domain Description: Cas_Cmr5 Location: 3804-4131 bp Feature: gene Location: 4151-4939 bp Ori: KAA3703404.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 4232-4928 bp Feature: domain Description: Cmr6_III-B Location: 4232-4928 bp Feature: gene Location: 4972-5923 bp Ori: KAA3703405.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5182-5785 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5 182-5 785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR