myRT

myRT report for GCA_008565305.1_ASM856530v1

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Seq: VWMP01000003.1 Bacteroides salyersiae strain BIOML-A15 scaffold3_size294310, whole genome shotgun sequence (294310 bp)
Overview 1 RT 1: 8202-13056 bp Neighborhood of RT #1 [8202, 13056] RVT-UG27 Feature: gene Location: 8202-8804 bp Feature: gene Location: 8791-9192 bp Feature: gene Location: 9182-10447 bp Ori: KAA3726986.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 9371-10007 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 9371 -1 0007 bp Feature: gene Location: 11479-11940 bp Feature: gene Location: 11962-13056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: VWMP01000010.1 Bacteroides salyersiae strain BIOML-A15 scaffold10_size189712, whole genome shotgun sequence (189712 bp)
Overview 1 RT 1: 169210-173460 bp Neighborhood of RT #1 [169210, 173460] RVT-DGRs Feature: gene Location: 169210-169971 bp Feature: gene Location: 170008-171435 bp Feature: gene Location: 171734-172780 bp Ori: KAA3724204.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 171941-172568 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 171941-172 568 bp Feature: gene Location: 172755-173144 bp Feature: gene Location: 173146-173460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VWMP01000017.1 Bacteroides salyersiae strain BIOML-A15 scaffold17_size151710, whole genome shotgun sequence (151710 bp)
Overview 1 RT 1: 91922-102274 bp Neighborhood of RT #1 [91922, 102274] CotH LRR_AMN1 RVT-DGRs Feature: gene Location: 91922-99487 bp Ori: KAA3721763.1 Feature: domain Description: CotH Location: 95759-96647 bp Feature: domain Description: CotH Location: 95759-96647 bp Feature: domain Description: LRR_AMN1 Location: 97280-97706 bp Feature: domain Description: LRR_AMN1 Location: 97280-97706 bp Feature: gene Location: 99612-99800 bp Feature: gene Location: 99992-101293 bp Ori: KAA3721764.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 100205-100802 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 100205-100802 bp Feature: gene Location: 101293-101775 bp Feature: gene Location: 101984-102274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs

Seq: VWMP01000034.1 Bacteroides salyersiae strain BIOML-A15 scaffold34_size56851, whole genome shotgun sequence (56851 bp)
Overview 1 RT 1: 34159-37649 bp Neighborhood of RT #1 [34159, 37672] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 34159-36432 bp Ori: KAA3718728.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 34369-34972 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 34 369-34 972 bp Feature: domain Description: Cas1_I-II-III Location: 35434-36394 bp Feature: domain Description: Cas1_I-II-III Location: 354 34 -36394 bp Feature: gene Location: 36465-37253 bp Ori: KAA3718729.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 36546-37242 bp Feature: domain Description: Cmr6_III-B Location: 3654 6-3724 2 bp Feature: gene Location: 37250-37672 bp Ori: KAA3718730.1 Feature: domain Description: Cas_Cmr5 Location: 37322-37649 bp Feature: domain Description: Cas_Cmr5 Location: 37322-3764 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: VWMP01000007.1 Bacteroides salyersiae strain BIOML-A15 scaffold7_size217804, whole genome shotgun sequence (217804 bp)
Overview 1 RT 1: 124219-135565 bp Neighborhood of RT #1 [124219, 135603] Laminin_G_3 CotH LRR_AMN1 RVT-DGRs Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 124219-125385 bp Feature: gene Location: 125395-132183 bp Ori: KAA3725338.1 Feature: domain Description: Laminin_G_3 Location: 127831-128212 bp Feature: domain Description: Laminin_G_3 Location: 127831-128212 bp Feature: domain Description: CotH Location: 128473-129415 bp Feature: domain Description: CotH Location: 128473-129415 bp Feature: domain Description: LRR_AMN1 Location: 129940-130387 bp Feature: domain Description: LRR_AMN1 Location: 129940-130387 bp Feature: gene Location: 132617-133912 bp Ori: KAA3725339.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 132833-133424 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 132833-133424 bp Feature: gene Location: 133914-134408 bp Feature: gene Location: 134458-135603 bp Ori: KAA3725341.1 Feature: domain Description: Arm-DNA-bind_5 Location: 134482-134728 bp Feature: domain Description: Arm-DNA-bind_5 Location: 134482-134728 bp Feature: domain Description: Phage_int_SAM_5 Location: 134767-135052 bp Feature: domain Description: Phage_int_SAM_5 Location: 134767-135 05 2 bp Feature: domain Description: INTN1_C_like Location: 135091-135565 bp Feature: domain Description: INTN1_C_like Location: 135 091-135 5 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: VWMP01000012.1 Bacteroides salyersiae strain BIOML-A15 scaffold12_size178672, whole genome shotgun sequence (178672 bp)
Overview 1 RT 1: 52374-58877 bp Neighborhood of RT #1 [52374, 58877] Relaxase Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 52374-53669 bp Ori: KAA3723455.1 Feature: domain Description: Relaxase Location: 52551-52842 bp Feature: domain Description: Relaxase Location: 52551-52842 bp Feature: domain Description: Relaxase Location: 53151-53403 bp Feature: domain Description: Relaxase Location: 53151-53403 bp Feature: gene Location: 53944-54867 bp Ori: KAA3723456.1 Feature: domain Description: YWFCY Location: 53950-54127 bp Feature: domain Description: YWFCY Location: 53950-54127 bp Feature: gene Location: 55504-57156 bp Ori: KAA3723457.1 Gene: ltrA Feature: domain Description: RVT_N Location: 55558-55801 bp Feature: domain Description: RVT_N Location: 55558-55801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55846-56494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55846 -56 494 bp Feature: domain Description: GIIM Note: maturase Location: 56548-56779 bp Feature: domain Description: GIIM Note: maturase Location: 56 548-56 779 bp Feature: gene Location: 57161-58366 bp Ori: KAA3723458.1 Feature: domain Description: TraG-D_C Location: 57743-58076 bp Feature: domain Description: TraG-D_C Location: 57743-58076 bp Feature: gene Location: 58482-58877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)