myRT

myRT report for GCA_008565395.1_ASM856539v1

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Seq: VWML01000017.1 Bacteroides salyersiae strain BIOML-A11 scaffold17_size147400, whole genome shotgun sequence (147400 bp)
Overview 1 RT 1: 19074-22549 bp Neighborhood of RT #1 [19074, 22587] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Feature: gene Location: 19074-19496 bp Ori: KAA3743923.1 Feature: domain Description: Cas_Cmr5 Location: 19146-19473 bp Feature: domain Description: Cas_Cmr5 Location: 1 91 46-1 9473 bp Feature: gene Location: 19493-20281 bp Ori: KAA3743924.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 19574-20270 bp Feature: domain Description: Cmr6_III-B Location: 1 9574-20270 bp Feature: gene Location: 20314-22587 bp Ori: KAA3743925.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 20524-21127 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 20524-21 1 27 bp Feature: domain Description: Cas1_I-II-III Location: 21589-22549 bp Feature: domain Description: Cas1 _I-II-III Location: 21 589-22549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: VWML01000014.1 Bacteroides salyersiae strain BIOML-A11 scaffold14_size178123, whole genome shotgun sequence (178123 bp)
Overview 1 RT 1: 51825-58328 bp Neighborhood of RT #1 [51825, 58328] Relaxase Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 51825-53120 bp Ori: KAA3744737.1 Feature: domain Description: Relaxase Location: 52002-52293 bp Feature: domain Description: Relaxase Location: 52 002 -52 2 93 bp Feature: domain Description: Relaxase Location: 52602-52854 bp Feature: domain Description: Relaxase Location: 52 602 -52 854 bp Feature: gene Location: 53395-54318 bp Ori: KAA3744738.1 Feature: domain Description: YWFCY Location: 53401-53578 bp Feature: domain Description: YWFCY Location: 53401-53578 bp Feature: gene Location: 54955-56607 bp Ori: KAA3744739.1 Gene: ltrA Feature: domain Description: RVT_N Location: 55009-55252 bp Feature: domain Description: RVT_N Location: 55009-552 52 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55297-55945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552 97-55945 bp Feature: domain Description: GIIM Note: maturase Location: 55999-56230 bp Feature: domain Description: GIIM Note: maturase Location: 55999-562 30 bp Feature: gene Location: 56612-57817 bp Ori: KAA3744740.1 Feature: domain Description: TraG-D_C Location: 57194-57527 bp Feature: domain Description: TraG-D_C Location: 57194-5752 7 bp Feature: gene Location: 57933-58328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)

Seq: VWML01000003.1 Bacteroides salyersiae strain BIOML-A11 scaffold3_size351319, whole genome shotgun sequence (351319 bp)
Overview 1 RT 1: 179621-189976 bp Neighborhood of RT #1 [179621, 189976] CotH LRR_AMN1 RVT-DGRs Feature: gene Location: 179621-187189 bp Ori: KAA3749938.1 Feature: domain Description: CotH Location: 183458-184346 bp Feature: domain Description: CotH Location: 183 458-1843 46 bp Feature: domain Description: LRR_AMN1 Location: 184979-185405 bp Feature: domain Description: LRR_AMN1 Location: 184979-185405 bp Feature: gene Location: 187314-187502 bp Feature: gene Location: 187694-188995 bp Ori: KAA3749939.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 187907-188504 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 187907-188504 bp Feature: gene Location: 188995-189477 bp Feature: gene Location: 189686-189976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs

Seq: VWML01000001.1 Bacteroides salyersiae strain BIOML-A11 scaffold1_size475228, whole genome shotgun sequence (475228 bp)
Overview 1 RT 1: 281663-286517 bp Neighborhood of RT #1 [281663, 286517] RVT-UG27 Feature: gene Location: 281663-282757 bp Feature: gene Location: 282779-283240 bp Feature: gene Location: 284272-285537 bp Ori: KAA3751596.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 284461-285097 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 284 4 61-285097 bp Feature: gene Location: 285527-285928 bp Feature: gene Location: 285915-286517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: VWML01000002.1 Bacteroides salyersiae strain BIOML-A11 scaffold2_size355370, whole genome shotgun sequence (355370 bp)
Overview 1 RT 1: 181911-186161 bp Neighborhood of RT #1 [181911, 186161] RVT-DGRs Feature: gene Location: 181911-182225 bp Feature: gene Location: 182227-182616 bp Feature: gene Location: 182591-183637 bp Ori: KAA3750568.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 182798-183425 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 182798-183425 bp Feature: gene Location: 183936-185363 bp Feature: gene Location: 185400-186161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VWML01000009.1 Bacteroides salyersiae strain BIOML-A11 scaffold9_size231203, whole genome shotgun sequence (231203 bp)
Overview 1 RT 1: 95577-106961 bp Neighborhood of RT #1 [95577, 106961] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 CotH LRR_AMN1 Feature: gene Location: 95577-96722 bp Ori: KAA3746653.1 Feature: domain Description: Arm-DNA-bind_5 Location: 95601-95847 bp Feature: domain Description: Arm-DNA-bind_5 Location: 956 01-95847 bp Feature: domain Description: Phage_int_SAM_5 Location: 95886-96171 bp Feature: domain Description: Phage_int_SAM_5 Location: 95886 -96 171 bp Feature: domain Description: INTN1_C_like Location: 96210-96684 bp Feature: domain Description: INTN1_C_like Location: 96 210-96 6 84 bp Feature: gene Location: 96772-97266 bp Feature: gene Location: 97268-98563 bp Ori: KAA3746655.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97484-98075 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97484-98075 bp Feature: gene Location: 98997-105785 bp Ori: KAA3746656.1 Feature: domain Description: Laminin_G_3 Location: 101433-101814 bp Feature: domain Description: Laminin_G_3 Location: 101433-101814 bp Feature: domain Description: CotH Location: 102075-103017 bp Feature: domain Description: CotH Location: 102075-103017 bp Feature: domain Description: LRR_AMN1 Location: 103542-103989 bp Feature: domain Description: LRR_AMN1 Location: 103542-103989 bp Feature: gene Location: 105795-106961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs, Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034)