myRT

myRT report for GCA_008565405.1_ASM856540v1

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Seq: VWMI01000009.1 Bacteroides salyersiae strain BIOML-A8 scaffold9_size237198, whole genome shotgun sequence (237198 bp)
Overview 1 RT 1: 95633-107017 bp Neighborhood of RT #1 [95633, 107017] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 CotH LRR_AMN1 Feature: gene Location: 95633-96778 bp Ori: KAA3779536.1 Feature: domain Description: Arm-DNA-bind_5 Location: 95657-95903 bp Feature: domain Description: Arm-DNA-bind_5 Location: 95657-95903 bp Feature: domain Description: Phage_int_SAM_5 Location: 95942-96227 bp Feature: domain Description: Phage_int_SAM_5 Location: 95942-96227 bp Feature: domain Description: INTN1_C_like Location: 96266-96740 bp Feature: domain Description: INTN1 _C_like Location: 96266-96740 bp Feature: gene Location: 96828-97322 bp Feature: gene Location: 97324-98619 bp Ori: KAA3779538.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97540-98131 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97540-981 31 bp Feature: gene Location: 99053-105841 bp Ori: KAA3779539.1 Feature: domain Description: Laminin_G_3 Location: 101489-101870 bp Feature: domain Description: Laminin_G_3 Location: 1 01 489-1 01 870 bp Feature: domain Description: CotH Location: 102131-103073 bp Feature: domain Description: CotH Location: 1 021 31 -1 03073 bp Feature: domain Description: LRR_AMN1 Location: 103598-104045 bp Feature: domain Description: LRR_AMN1 Location: 1 03598-1 04045 bp Feature: gene Location: 105851-107017 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs, Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034)

Seq: VWMI01000003.1 Bacteroides salyersiae strain BIOML-A8 scaffold3_size355263, whole genome shotgun sequence (355263 bp)
Overview 1 RT 1: 181804-186054 bp Neighborhood of RT #1 [181804, 186054] RVT-DGRs Feature: gene Location: 181804-182118 bp Feature: gene Location: 182120-182509 bp Feature: gene Location: 182484-183530 bp Ori: KAA3783515.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 182691-183318 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 182 691-183318 bp Feature: gene Location: 183829-185256 bp Feature: gene Location: 185293-186054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VWMI01000006.1 Bacteroides salyersiae strain BIOML-A8 scaffold6_size267219, whole genome shotgun sequence (267219 bp)
Overview 1 RT 1: 95525-105876 bp Neighborhood of RT #1 [95525, 105876] CotH LRR_AMN1 RVT-DGRs Feature: gene Location: 95525-103089 bp Feature: domain Description: CotH Location: 99362-100250 bp Feature: domain Description: CotH Location: 993 62-100250 bp Feature: domain Description: LRR_AMN1 Location: 100883-101309 bp Feature: domain Description: LRR_AMN1 Location: 100883 -1013 09 bp Feature: gene Location: 103214-103402 bp Feature: gene Location: 103594-104895 bp Ori: KAA3781618.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 103807-104404 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 103 807-104404 bp Feature: gene Location: 104895-105377 bp Feature: gene Location: 105586-105876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs

Seq: VWMI01000016.1 Bacteroides salyersiae strain BIOML-A8 scaffold16_size147399, whole genome shotgun sequence (147399 bp)
Overview 1 RT 1: 124813-128303 bp Neighborhood of RT #1 [124813, 128326] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 124813-127086 bp Ori: KAA3776655.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 125023-125626 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 125023-125626 bp Feature: domain Description: Cas1_I-II-III Location: 126088-127048 bp Feature: domain Description: Cas1_I-II-III Location: 126088-12704 8 bp Feature: gene Location: 127119-127907 bp Ori: KAA3776656.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 127200-127896 bp Feature: domain Description: Cmr6_III-B Location: 127200-127896 bp Feature: gene Location: 127904-128326 bp Ori: KAA3776657.1 Feature: domain Description: Cas_Cmr5 Location: 127976-128303 bp Feature: domain Description: Cas_Cmr5 Location: 127976-128303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: VWMI01000012.1 Bacteroides salyersiae strain BIOML-A8 scaffold12_size178672, whole genome shotgun sequence (178672 bp)
Overview 1 RT 1: 52374-58877 bp Neighborhood of RT #1 [52374, 58877] Relaxase Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 52374-53669 bp Ori: KAA3778329.1 Feature: domain Description: Relaxase Location: 52551-52842 bp Feature: domain Description: Relaxase Location: 5 25 5 1-5 2842 bp Feature: domain Description: Relaxase Location: 53151-53403 bp Feature: domain Description: Relaxase Location: 5 315 1-5 3403 bp Feature: gene Location: 53944-54867 bp Ori: KAA3778330.1 Feature: domain Description: YWFCY Location: 53950-54127 bp Feature: domain Description: YWFCY Location: 5 395 0-5 4127 bp Feature: gene Location: 55504-57156 bp Ori: KAA3778331.1 Gene: ltrA Feature: domain Description: RVT_N Location: 55558-55801 bp Feature: domain Description: RVT_N Location: 5 5 5 5 8-5 5 801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55846-56494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 5 846-5 6494 bp Feature: domain Description: GIIM Note: maturase Location: 56548-56779 bp Feature: domain Description: GIIM Note: maturase Location: 5 65 48-5 6779 bp Feature: gene Location: 57161-58366 bp Ori: KAA3778332.1 Feature: domain Description: TraG-D_C Location: 57743-58076 bp Feature: domain Description: TraG-D_C Location: 5 7743-5 8076 bp Feature: gene Location: 58482-58877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)

Seq: VWMI01000002.1 Bacteroides salyersiae strain BIOML-A8 scaffold2_size475228, whole genome shotgun sequence (475228 bp)
Overview 1 RT 1: 281663-286517 bp Neighborhood of RT #1 [281663, 286517] RVT-UG27 Feature: gene Location: 281663-282757 bp Feature: gene Location: 282779-283240 bp Feature: gene Location: 284272-285537 bp Ori: KAA3784338.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 284461-285097 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 28446 1-285097 bp Feature: gene Location: 285527-285928 bp Feature: gene Location: 285915-286517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27