myRT

myRT report for GCA_008565475.1_ASM856547v1

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Seq: VWMH01000003.1 Bacteroides salyersiae strain BIOML-A7 scaffold3_size355263, whole genome shotgun sequence (355263 bp)
Overview 1 RT 1: 181804-186054 bp Neighborhood of RT #1 [181804, 186054] RVT-DGRs Feature: gene Location: 181804-182118 bp Feature: gene Location: 182120-182509 bp Feature: gene Location: 182484-183530 bp Ori: KAA3763306.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 182691-183318 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 82691 -1 8331 8 bp Feature: gene Location: 183829-185256 bp Feature: gene Location: 185293-186054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VWMH01000002.1 Bacteroides salyersiae strain BIOML-A7 scaffold2_size475228, whole genome shotgun sequence (475228 bp)
Overview 1 RT 1: 281663-286517 bp Neighborhood of RT #1 [281663, 286517] RVT-UG27 Feature: gene Location: 281663-282757 bp Feature: gene Location: 282779-283240 bp Feature: gene Location: 284272-285537 bp Ori: KAA3764198.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 284461-285097 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 2 84461-2 85097 bp Feature: gene Location: 285527-285928 bp Feature: gene Location: 285915-286517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: VWMH01000004.1 Bacteroides salyersiae strain BIOML-A7 scaffold4_size351316, whole genome shotgun sequence (351316 bp)
Overview 1 RT 1: 179621-189973 bp Neighborhood of RT #1 [179621, 189973] CotH LRR_AMN1 RVT-DGRs Feature: gene Location: 179621-187186 bp Ori: KAA3762611.1 Feature: domain Description: CotH Location: 183458-184346 bp Feature: domain Description: CotH Location: 183 458-1843 46 bp Feature: domain Description: LRR_AMN1 Location: 184979-185405 bp Feature: domain Description: LRR_AMN1 Location: 184979-185405 bp Feature: gene Location: 187311-187499 bp Feature: gene Location: 187691-188992 bp Ori: KAA3762612.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 187904-188501 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 187904-188501 bp Feature: gene Location: 188992-189474 bp Feature: gene Location: 189683-189973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs

Seq: VWMH01000007.1 Bacteroides salyersiae strain BIOML-A7 scaffold7_size250918, whole genome shotgun sequence (250918 bp)
Overview 1 RT 1: 145401-156747 bp Neighborhood of RT #1 [145401, 156785] Laminin_G_3 CotH LRR_AMN1 RVT-DGRs Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 145401-146567 bp Feature: gene Location: 146577-153365 bp Ori: KAA3761164.1 Feature: domain Description: Laminin_G_3 Location: 149013-149394 bp Feature: domain Description: Laminin_G_3 Location: 14 9013-14 9394 bp Feature: domain Description: CotH Location: 149655-150597 bp Feature: domain Description: CotH Location: 14 9655-150597 bp Feature: domain Description: LRR_AMN1 Location: 151122-151569 bp Feature: domain Description: LRR_AMN1 Location: 151122-151569 bp Feature: gene Location: 153799-155094 bp Ori: KAA3761165.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 154015-154606 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 154 015-154 606 bp Feature: gene Location: 155096-155590 bp Feature: gene Location: 155640-156785 bp Ori: KAA3761167.1 Feature: domain Description: Arm-DNA-bind_5 Location: 155664-155910 bp Feature: domain Description: Arm-DNA-bind_5 Location: 155664 -155910 bp Feature: domain Description: Phage_int_SAM_5 Location: 155949-156234 bp Feature: domain Description: Phage_int_SAM_5 Location: 15594 9-156234 bp Feature: domain Description: INTN1_C_like Location: 156273-156747 bp Feature: domain Description: INTN1_C_like Location: 156273-15674 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: VWMH01000011.1 Bacteroides salyersiae strain BIOML-A7 scaffold11_size178672, whole genome shotgun sequence (178672 bp)
Overview 1 RT 1: 52374-58877 bp Neighborhood of RT #1 [52374, 58877] Relaxase Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 52374-53669 bp Ori: KAA3759399.1 Feature: domain Description: Relaxase Location: 52551-52842 bp Feature: domain Description: Relaxase Location: 5 25 5 1-5 2842 bp Feature: domain Description: Relaxase Location: 53151-53403 bp Feature: domain Description: Relaxase Location: 5 315 1-5 3403 bp Feature: gene Location: 53944-54867 bp Ori: KAA3759400.1 Feature: domain Description: YWFCY Location: 53950-54127 bp Feature: domain Description: YWFCY Location: 5 395 0-5 4127 bp Feature: gene Location: 55504-57156 bp Ori: KAA3759401.1 Gene: ltrA Feature: domain Description: RVT_N Location: 55558-55801 bp Feature: domain Description: RVT_N Location: 5 5 5 5 8-5 5 801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55846-56494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 5 846-5 6494 bp Feature: domain Description: GIIM Note: maturase Location: 56548-56779 bp Feature: domain Description: GIIM Note: maturase Location: 5 65 48-5 6779 bp Feature: gene Location: 57161-58366 bp Ori: KAA3759402.1 Feature: domain Description: TraG-D_C Location: 57743-58076 bp Feature: domain Description: TraG-D_C Location: 5 7743-5 8076 bp Feature: gene Location: 58482-58877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)

Seq: VWMH01000026.1 Bacteroides salyersiae strain BIOML-A7 scaffold26_size64286, whole genome shotgun sequence (64286 bp)
Overview 1 RT 1: 41594-45084 bp Neighborhood of RT #1 [41594, 45107] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 41594-43867 bp Ori: KAA3756627.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 41804-42407 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 41804-42407 bp Feature: domain Description: Cas1_I-II-III Location: 42869-43829 bp Feature: domain Description: Cas1_I-II-III Location: 4286 9-43829 bp Feature: gene Location: 43900-44688 bp Ori: KAA3756628.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 43981-44677 bp Feature: domain Description: Cmr6 _III-B Location: 43981-446 77 bp Feature: gene Location: 44685-45107 bp Ori: KAA3756629.1 Feature: domain Description: Cas_Cmr5 Location: 44757-45084 bp Feature: domain Description: Cas_Cmr5 Location: 44757-45084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)