myRT

myRT report for GCA_008565565.1_ASM856556v1

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Seq: VWMD01000007.1 Bacteroides salyersiae strain BIOML-A3 scaffold7_size237227, whole genome shotgun sequence (237227 bp)
Overview 1 RT 1: 95633-107017 bp Neighborhood of RT #1 [95633, 107017] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 CotH LRR_AMN1 Feature: gene Location: 95633-96778 bp Ori: KAA3778888.1 Feature: domain Description: Arm-DNA-bind_5 Location: 95657-95903 bp Feature: domain Description: Arm-DNA-bind_5 Location: 95657-95903 bp Feature: domain Description: Phage_int_SAM_5 Location: 95942-96227 bp Feature: domain Description: Phage_int_SAM_5 Location: 95942-96227 bp Feature: domain Description: INTN1_C_like Location: 96266-96740 bp Feature: domain Description: INTN1 _C_like Location: 96266-96740 bp Feature: gene Location: 96828-97322 bp Feature: gene Location: 97324-98619 bp Ori: KAA3778890.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97540-98131 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97540-981 31 bp Feature: gene Location: 99053-105841 bp Ori: KAA3778891.1 Feature: domain Description: Laminin_G_3 Location: 101489-101870 bp Feature: domain Description: Laminin_G_3 Location: 1 01 489-1 01 870 bp Feature: domain Description: CotH Location: 102131-103073 bp Feature: domain Description: CotH Location: 1 021 31 -1 03073 bp Feature: domain Description: LRR_AMN1 Location: 103598-104045 bp Feature: domain Description: LRR_AMN1 Location: 1 03598-1 04045 bp Feature: gene Location: 105851-107017 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs, Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034)

Seq: VWMD01000012.1 Bacteroides salyersiae strain BIOML-A3 scaffold12_size178672, whole genome shotgun sequence (178672 bp)
Overview 1 RT 1: 52374-58877 bp Neighborhood of RT #1 [52374, 58877] Relaxase Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 52374-53669 bp Ori: KAA3776992.1 Feature: domain Description: Relaxase Location: 52551-52842 bp Feature: domain Description: Relaxase Location: 52 551-52 842 bp Feature: domain Description: Relaxase Location: 53151-53403 bp Feature: domain Description: Relaxase Location: 53151-53403 bp Feature: gene Location: 53944-54867 bp Ori: KAA3776993.1 Feature: domain Description: YWFCY Location: 53950-54127 bp Feature: domain Description: YWFCY Location: 53950-5412 7 bp Feature: gene Location: 55504-57156 bp Ori: KAA3776994.1 Gene: ltrA Feature: domain Description: RVT_N Location: 55558-55801 bp Feature: domain Description: RVT_N Location: 55558-55801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55846-56494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55846-56494 bp Feature: domain Description: GIIM Note: maturase Location: 56548-56779 bp Feature: domain Description: GIIM Note: maturase Location: 56548-56779 bp Feature: gene Location: 57161-58366 bp Ori: KAA3776995.1 Feature: domain Description: TraG-D_C Location: 57743-58076 bp Feature: domain Description: TraG-D_C Location: 57743-58076 bp Feature: gene Location: 58482-58877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)

Seq: VWMD01000030.1 Bacteroides salyersiae strain BIOML-A3 scaffold30_size56858, whole genome shotgun sequence (56858 bp)
Overview 1 RT 1: 19074-22549 bp Neighborhood of RT #1 [19074, 22587] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Feature: gene Location: 19074-19496 bp Ori: KAA3772954.1 Feature: domain Description: Cas_Cmr5 Location: 19146-19473 bp Feature: domain Description: Cas_Cmr5 Location: 19146-19473 bp Feature: gene Location: 19493-20281 bp Ori: KAA3772955.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 19574-20270 bp Feature: domain Description: Cmr6_III-B Location: 19574-20270 bp Feature: gene Location: 20314-22587 bp Ori: KAA3772956.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 20524-21127 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 20524-21127 bp Feature: domain Description: Cas1_I-II-III Location: 21589-22549 bp Feature: domain Description: Cas1_I-II-III Location: 21589-22549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: VWMD01000006.1 Bacteroides salyersiae strain BIOML-A3 scaffold6_size239434, whole genome shotgun sequence (239434 bp)
Overview 1 RT 1: 179621-189973 bp Neighborhood of RT #1 [179621, 189973] CotH LRR_AMN1 RVT-DGRs Feature: gene Location: 179621-187186 bp Ori: KAA3779375.1 Feature: domain Description: CotH Location: 183458-184346 bp Feature: domain Description: CotH Location: 1834 58-184 34 6 bp Feature: domain Description: LRR_AMN1 Location: 184979-185405 bp Feature: domain Description: LRR_AMN1 Location: 184 979-1854 05 bp Feature: gene Location: 187311-187499 bp Feature: gene Location: 187691-188992 bp Ori: KAA3779376.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 187904-188501 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 187904 -188501 bp Feature: gene Location: 188992-189474 bp Feature: gene Location: 189683-189973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs

Seq: VWMD01000002.1 Bacteroides salyersiae strain BIOML-A3 scaffold2_size355263, whole genome shotgun sequence (355263 bp)
Overview 1 RT 1: 181804-186054 bp Neighborhood of RT #1 [181804, 186054] RVT-DGRs Feature: gene Location: 181804-182118 bp Feature: gene Location: 182120-182509 bp Feature: gene Location: 182484-183530 bp Ori: KAA3781377.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 182691-183318 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 182691-183318 bp Feature: gene Location: 183829-185256 bp Feature: gene Location: 185293-186054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VWMD01000004.1 Bacteroides salyersiae strain BIOML-A3 scaffold4_size296157, whole genome shotgun sequence (296157 bp)
Overview 1 RT 1: 281513-286367 bp Neighborhood of RT #1 [281513, 286367] RVT-UG27 Feature: gene Location: 281513-282607 bp Feature: gene Location: 282629-283090 bp Feature: gene Location: 284122-285387 bp Ori: KAA3780526.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 284311-284947 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 284311-284947 bp Feature: gene Location: 285377-285778 bp Feature: gene Location: 285765-286367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27