myRT

myRT report for GCA_008569025.1_ASM856902v1

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Seq: VWFB01000102.1 Bacteroides intestinalis strain BIOML-A2 scaffold102_size19720, whole genome shotgun sequence (19720 bp)
Overview 1 RT 1: 10775-14571 bp Neighborhood of RT #1 [10775, 14571] RVT-DGRs RVT-DGRs Feature: gene Location: 10775-12094 bp Feature: gene Location: 12124-12327 bp Feature: gene Location: 12611-13426 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12944-13268 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 2944-1 3268 bp Feature: gene Location: 13308-13622 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13317-13548 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 331 7-1 3548 bp Feature: gene Location: 13570-14154 bp Feature: gene Location: 14176-14571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VWFB01000222.1 Bacteroides intestinalis strain BIOML-A2 scaffold222_size4928, whole genome shotgun sequence (4928 bp)
Overview 1 RT 1: 198-3995 bp Neighborhood of RT #1 [198, 4252] RVT-UG3 DUF2971 Feature: gene Location: 198-1661 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 648-1161 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 648-1161 bp Feature: gene Location: 2076-2990 bp Feature: gene Location: 3407-4252 bp Feature: domain Description: DUF2971 Location: 3791-3995 bp Feature: domain Description: DUF2 971 Location: 3791-3995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, DUF2971 (pfam11185)

Seq: VWFB01000417.1 Bacteroides intestinalis strain BIOML-A2 scaffold417_size2216, whole genome shotgun sequence (2216 bp)
Overview 1 RT 1: 233-1088 bp Neighborhood of RT #1 [233, 2215] RVT-UG8 Feature: gene Location: 233-2215 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 638-1088 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 63 8-1088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8

Seq: VWFB01000004.1 Bacteroides intestinalis strain BIOML-A2 scaffold4_size139572, whole genome shotgun sequence (139572 bp)
Overview 1 RT 1: 119165-124131 bp Neighborhood of RT #1 [119165, 124131] Mfa2 DUF4906 Fib_succ_major RVT-Retrons HTH_XRE Feature: gene Location: 119165-120052 bp Feature: domain Description: Mfa2 Location: 119252-120041 bp Feature: domain Description: Mfa2 Location: 119252-12004 1 bp Feature: gene Location: 120083-122428 bp Feature: domain Description: DUF4906 Location: 120446-121055 bp Feature: domain Description: DUF4 906 Location: 1204 4 6-121055 bp Feature: domain Description: Fib_succ_major Location: 121886-122417 bp Feature: domain Description: Fib_succ_major Location: 121886-1224 17 bp Feature: gene Location: 122709-123569 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 122868-123393 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 122868-123393 bp Feature: gene Location: 123571-123873 bp Feature: domain Description: HTH_XRE Location: 123583-123745 bp Feature: domain Description: HTH_XRE Location: 123583-12374 5 bp Feature: gene Location: 123901-124131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mfa2 (pfam08842), DUF4906 (pfam16249), Fib_succ_major (TIGR02145), RVT-Retrons, HTH_XRE (smart00530)