myRT

myRT report for GCA_008571625.1_ASM857162v1

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Seq: VWAA01000085.1 Bacteroides faecis strain BIOML-A2 scaffold85_size22991, whole genome shotgun sequence (22991 bp)
Overview 1 RT 1: 53-2317 bp Neighborhood of RT #1 [53, 2331] RVT-GII DUF4134 DUF4134 Feature: gene Location: 53-1120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317-1103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 7-1 1 03 bp Feature: gene Location: 1662-1940 bp Ori: KAA5295504.1 Feature: domain Description: DUF4134 Location: 1725-1923 bp Feature: domain Description: DUF41 34 Location: 1 725-1 923 bp Feature: gene Location: 1999-2331 bp Ori: KAA5295505.1 Feature: domain Description: DUF4134 Location: 2029-2317 bp Feature: domain Description: DUF41 34 Location: 2029-231 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF4134 (pfam13572)

Seq: VWAA01000174.1 Bacteroides faecis strain BIOML-A2 scaffold174_size2386, whole genome shotgun sequence (2386 bp)
Overview 1 RT 1: 135-2145 bp Neighborhood of RT #1 [135, 2192] RVT-DGRs Avd_like Feature: gene Location: 135-410 bp Feature: gene Location: 376-1797 bp Ori: KAA5291102.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 748-1453 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 748-1453 bp Feature: gene Location: 1812-2192 bp Ori: KAA5291103.1 Feature: domain Description: Avd_like Location: 1839-2145 bp Feature: domain Description: Avd_like Location: 1839-2 145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: VWAA01000012.1 Bacteroides faecis strain BIOML-A2 scaffold12_size113279, whole genome shotgun sequence (113279 bp)
Overview 1 RT 1: 24513-34743 bp Neighborhood of RT #1 [24513, 34743] DUF1566 Avd_like DUF1566 RVT-DGRs Feature: gene Location: 24513-30542 bp Ori: KAA5302193.1 Feature: domain Description: DUF1566 Location: 30225-30531 bp Feature: domain Description: DUF1566 Location: 3 0225-3 053 1 bp Feature: gene Location: 30672-31073 bp Ori: KAA5302194.1 Feature: domain Description: Avd_like Location: 30711-31050 bp Feature: domain Description: Avd_like Location: 3 0711-3 1050 bp Feature: gene Location: 31086-32507 bp Ori: KAA5302195.1 Feature: domain Description: DUF1566 Location: 31158-31302 bp Feature: domain Description: DUF1566 Location: 3 1158-3 13 02 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31491-32232 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 1491-3 223 2 bp Feature: gene Location: 32498-32851 bp Feature: gene Location: 32914-34743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: VWAA01000048.1 Bacteroides faecis strain BIOML-A2 scaffold48_size52629, whole genome shotgun sequence (52629 bp)
Overview 1 RT 1: 30579-41373 bp Neighborhood of RT #1 [30579, 41441] N6_Mtase COG4646 RVT_N RVT-GII GIIM Spc7 PRK13351 Feature: gene Location: 30579-35267 bp Ori: KAA5297681.1 Feature: domain Description: N6_Mtase Location: 30891-31494 bp Feature: domain Description: N6_Mtase Location: 30891-314 94 bp Feature: domain Description: COG4646 Location: 32823-34884 bp Feature: domain Description: COG4 64 6 Location: 32823-34 884 bp Feature: gene Location: 35755-35958 bp Feature: gene Location: 35924-37591 bp Ori: KAA5297683.1 Gene: ltrA Feature: domain Description: RVT_N Location: 35978-36221 bp Feature: domain Description: RVT_N Location: 35978-36221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36266-36914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36266-36914 bp Feature: domain Description: GIIM Note: maturase Location: 36968-37199 bp Feature: domain Description: GIIM Note: maturase Location: 36968-37199 bp Feature: gene Location: 37593-38858 bp Ori: KAA5297690.1 Feature: domain Description: Spc7 Location: 38469-38736 bp Feature: domain Description: Spc7 Location: 384 69-38736 bp Feature: gene Location: 39516-41441 bp Ori: KAA5297684.1 Gene: tet(Q) Feature: domain Description: PRK13351 Location: 39519-41373 bp Feature: domain Description: PRK13351 Location: 39519-4 1373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Spc7 (smart00787), PRK13351 (elongation factor G-like protein)