myRT

myRT report for GCA_008571695.1_ASM857169v1

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Seq: VVZX01000011.1 Bacteroides eggerthii strain BIOML-A1 scaffold11_size109793, whole genome shotgun sequence (109793 bp)
Overview 1 RT 1: 89348-98778 bp Neighborhood of RT #1 [89348, 98778] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 89348-96067 bp Feature: domain Description: Laminin_G_3 Location: 90791-90869 bp Feature: domain Description: Laminin_G_3 Location: 90791 -90869 bp Feature: domain Description: Laminin_G_3 Location: 91520-91946 bp Feature: domain Description: Laminin_G_3 Location: 91 520-91 946 bp Feature: gene Location: 96312-96467 bp Feature: gene Location: 96505-97875 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 96784-97459 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 96784-97459 bp Feature: gene Location: 97872-98357 bp Feature: gene Location: 98536-98778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: VVZX01000016.1 Bacteroides eggerthii strain BIOML-A1 scaffold16_size94764, whole genome shotgun sequence (94764 bp)
Overview 1 RT 1: 29284-32104 bp Neighborhood of RT #1 [29284, 32104] RVT-DGRs Feature: gene Location: 29284-29526 bp Feature: gene Location: 29712-30161 bp Feature: gene Location: 30194-31495 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30404-31082 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30404-31082 bp Feature: gene Location: 31592-31849 bp Feature: gene Location: 31871-32104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VVZX01000002.1 Bacteroides eggerthii strain BIOML-A1 scaffold2_size266786, whole genome shotgun sequence (266786 bp)
Overview 1 RT 1: 120754-122784 bp Neighborhood of RT #1 [120754, 122784] RVT-DGRs Feature: gene Location: 120754-120957 bp Feature: gene Location: 120997-121179 bp Feature: gene Location: 121241-122056 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 121559-121895 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 121559-121895 bp Feature: gene Location: 122022-122252 bp Feature: gene Location: 122200-122784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VVZX01000003.1 Bacteroides eggerthii strain BIOML-A1 scaffold3_size241476, whole genome shotgun sequence (241476 bp)
Overview 1 RT 1: 77542-82453 bp Neighborhood of RT #1 [77542, 84615] RVT-DGRs Prophage_tail Prophage_tail Feature: gene Location: 77542-78879 bp Feature: gene Location: 78901-79125 bp Feature: gene Location: 79313-80485 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 79529-80195 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 79529-80195 bp Feature: gene Location: 80597-81004 bp Feature: gene Location: 81010-84615 bp Feature: domain Description: Prophage_tail Location: 81286-81565 bp Feature: domain Description: Prophage_tail Location: 81286-81565 bp Feature: domain Description: Prophage_tail Location: 82210-82453 bp Feature: domain Description: Prophage_tail Location: 82210-824 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Prophage_tail (pfam06605)

Seq: VVZX01000042.1 Bacteroides eggerthii strain BIOML-A1 scaffold42_size28509, whole genome shotgun sequence (28509 bp)
Overview 1 RT 1: 13427-22645 bp Neighborhood of RT #1 [13427, 22647] COG4646 Helicase_C matK RVT-GII Intron_maturas2 N6_Mtase N6_Mtase COG4646 DUF1896 Feature: gene Location: 13427-13567 bp Feature: gene Location: 13772-16537 bp Feature: domain Description: COG4646 Location: 13886-15026 bp Feature: domain Description: COG4646 Location: 13886-15 026 bp Feature: domain Description: Helicase_C Location: 15239-15437 bp Feature: domain Description: Helicase_C Location: 15 239-15 437 bp Feature: gene Location: 16524-18326 bp Feature: domain Description: matK Location: 16593-16680 bp Feature: domain Description: matK Location: 165 93-16680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16788-17610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16788-17610 bp Feature: domain Description: Intron_maturas2 Location: 17760-17994 bp Feature: domain Description: Intron_maturas2 Location: 17760-17994 bp Feature: gene Location: 18879-22070 bp Feature: domain Description: N6_Mtase Location: 19191-19299 bp Feature: domain Description: N6_Mtase Location: 19191-19299 bp Feature: domain Description: N6_Mtase Location: 19437-19794 bp Feature: domain Description: N6_Mtase Location: 19437-19794 bp Feature: domain Description: COG4646 Location: 21123-22059 bp Feature: domain Description: COG4646 Location: 21123-2205 9 bp Feature: gene Location: 22060-22647 bp Feature: domain Description: DUF1896 Location: 22225-22645 bp Feature: domain Description: DUF1896 Location: 22225 -22645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), Helicase_C (pfam00271), matK (CHL00002), RVT-GII, Intron_maturas2 (pfam01348), N6_Mtase (pfam02384), DUF1896 (pfam08989)

Seq: VVZX01000046.1 Bacteroides eggerthii strain BIOML-A1 scaffold46_size31536, whole genome shotgun sequence (31536 bp)
Overview 1 RT 1: 221-4939 bp Neighborhood of RT #1 [221, 4939] Dam RVT-DGRs Feature: gene Location: 221-1063 bp Feature: domain Description: Dam Location: 224-992 bp Feature: domain Description: Dam Location: 224-992 bp Feature: gene Location: 1250-1660 bp Feature: gene Location: 1693-2997 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1882-2542 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1882-2542 bp Feature: gene Location: 3014-3322 bp Feature: gene Location: 3503-4939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Dam (pfam05869)

Seq: VVZX01000005.1 Bacteroides eggerthii strain BIOML-A1 scaffold5_size203308, whole genome shotgun sequence (203308 bp)
Overview 1 RT 1: 31082-36274 bp Neighborhood of RT #1 [31082, 36285] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Feature: gene Location: 31082-32020 bp Feature: domain Description: Bac_Flav_CT_G Location: 31085-32006 bp Feature: domain Description: Bac_Flav_CT_G Location: 31085-32006 bp Feature: gene Location: 32199-32348 bp Feature: gene Location: 32604-34265 bp Feature: RT Description: RVT_N Location: 32658-32901 bp Feature: RT Description: RVT_N Location: 32658-32901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32946-33594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32946-33594 bp Feature: domain Description: GIIM Note: maturase Location: 33648-33879 bp Feature: domain Description: GIIM Note: maturase Location: 33648-3387 9 bp Feature: gene Location: 34262-35956 bp Feature: domain Description: Bac_Flav_CT_G Location: 34382-35948 bp Feature: domain Description: Bac_Flav_CT_G Location: 34382-35948 bp Feature: gene Location: 35971-36285 bp Feature: domain Description: DUF3876 Location: 36025-36274 bp Feature: domain Description: DUF387 6 Location: 36025-3627 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3876 (pfam12992)

Seq: VVZX01000062.1 Bacteroides eggerthii strain BIOML-A1 scaffold62_size4048, whole genome shotgun sequence (4048 bp)
Overview 1 RT 1: 330-3517 bp Neighborhood of RT #1 [330, 3858] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 Feature: gene Location: 330-1499 bp Feature: domain Description: Arm-DNA-bind_5 Location: 360-615 bp Feature: domain Description: Arm-DNA-bind_5 Location: 360-615 bp Feature: domain Description: Phage_int_SAM_5 Location: 654-975 bp Feature: domain Description: Phage_int_SAM_5 Location: 654-975 bp Feature: domain Description: INTN1_C_like Location: 1014-1482 bp Feature: domain Description: INTN1_C_like Location: 1014-148 2 bp Feature: gene Location: 1688-1816 bp Feature: gene Location: 2050-3858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2314-3136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2314-3136 bp Feature: domain Description: Intron_maturas2 Location: 3262-3517 bp Feature: domain Description: Intron_maturas2 Location: 3262-3517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: VVZX01000066.1 Bacteroides eggerthii strain BIOML-A1 scaffold66_size2420, whole genome shotgun sequence (2420 bp)
Overview 1 RT 1: 347-1922 bp Neighborhood of RT #1 [347, 2299] RVT_N RVT-GII GIIM Feature: gene Location: 347-481 bp Feature: gene Location: 647-2299 bp Feature: RT Description: RVT_N Location: 701-944 bp Feature: RT Description: RVT_N Location: 701-9 44 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989-1637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 89 -1637 bp Feature: domain Description: GIIM Note: maturase Location: 1691-1922 bp Feature: domain Description: GIIM Note: maturase Location: 169 1-19 22 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)