myRT

myRT report for GCA_008572535.1_ASM857253v1

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Seq: VVYH01000001.1 Bacteroides caccae strain BIOML-A23 scaffold1_size531599, whole genome shotgun sequence (531349 bp)
Overview 1 RT 1: 27145-30353 bp Neighborhood of RT #1 [27145, 30353] RVT-UG27 Feature: gene Location: 27145-27423 bp Feature: gene Location: 27453-27719 bp Feature: gene Location: 27769-29031 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 27961-28597 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 27961 -28597 bp Feature: gene Location: 29024-29692 bp Feature: gene Location: 29706-30353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: VVYH01000022.1 Bacteroides caccae strain BIOML-A23 scaffold22_size114472, whole genome shotgun sequence (114237 bp)
Overview 1 RT 1: 3-4709 bp Neighborhood of RT #1 [3, 8830] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 3-293 bp Feature: gene Location: 290-1594 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 503-1097 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 503-1097 bp Feature: gene Location: 1696-1914 bp Feature: gene Location: 2111-8830 bp Feature: domain Description: Laminin_G_3 Location: 3554-3632 bp Feature: domain Description: Laminin_G_3 Location: 3554-3632 bp Feature: domain Description: Laminin_G_3 Location: 4283-4709 bp Feature: domain Description: Laminin_G_3 Location: 42 83-4709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385)

Seq: VVYH01000007.1 Bacteroides caccae strain BIOML-A23 scaffold7_size240379, whole genome shotgun sequence (240379 bp)
Overview 1 RT 1: 34696-44866 bp Neighborhood of RT #1 [34696, 44904] Laminin_G_3 pfam08757 LRR_AMN1 RVT-DGRs Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 34696-41484 bp Feature: domain Description: Laminin_G_3 Location: 37132-37513 bp Feature: domain Description: Laminin_G_3 Location: 3 713 2-3 7513 bp Feature: domain Description: pfam08757 Location: 38308-38632 bp Feature: domain Description: pfam08757 Location: 3 83 08-3 863 2 bp Feature: domain Description: LRR_AMN1 Location: 39244-39688 bp Feature: domain Description: LRR_AMN1 Location: 3 9244-3 9688 bp Feature: gene Location: 41545-41712 bp Feature: gene Location: 41857-43212 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42133-42724 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4213 3 -42724 bp Feature: gene Location: 43214-43708 bp Feature: gene Location: 43759-44904 bp Feature: domain Description: Arm-DNA-bind_5 Location: 43783-44029 bp Feature: domain Description: Arm-DNA-bind_5 Location: 43 783 -44029 bp Feature: domain Description: Phage_int_SAM_5 Location: 44068-44353 bp Feature: domain Description: Phage_int_SAM_5 Location: 44068-443 53 bp Feature: domain Description: INTN1_C_like Location: 44392-44866 bp Feature: domain Description: INTN1_C_like Location: 443 92-44866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), pfam08757 (CotH;CotH kinase protein), LRR_AMN1 (sd00034), RVT-DGRs, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)