myRT

myRT report for GCA_008572545.1_ASM857254v1

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Seq: VVYG01000021.1 Bacteroides caccae strain BIOML-A22 scaffold21_size114049, whole genome shotgun sequence (114049 bp)
Overview 1 RT 1: 279-3007 bp Neighborhood of RT #1 [279, 3007] RVT-DGRs Feature: gene Location: 279-521 bp Feature: gene Location: 701-1186 bp Feature: gene Location: 1183-2487 bp Ori: KAA5485951.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1396-1990 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 396-1 990 bp Feature: gene Location: 2582-2816 bp Feature: gene Location: 2813-3007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VVYG01000006.1 Bacteroides caccae strain BIOML-A22 scaffold6_size279402, whole genome shotgun sequence (279172 bp)
Overview 1 RT 1: 248820-252753 bp Neighborhood of RT #1 [248820, 252753] RVT-UG27 Feature: gene Location: 248820-249467 bp Feature: gene Location: 249481-250149 bp Feature: gene Location: 250142-251404 bp Ori: KAA5492599.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 250334-250970 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 2 50334-2 50970 bp Feature: gene Location: 251727-252224 bp Feature: gene Location: 252274-252753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: VVYG01000002.1 Bacteroides caccae strain BIOML-A22 scaffold2_size446981, whole genome shotgun sequence (446981 bp)
Overview 1 RT 1: 105306-119185 bp Neighborhood of RT #1 [105306, 119187] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons GlnA3 Feature: gene Location: 105306-107102 bp Ori: KAA5495331.1 Feature: domain Description: rpsA Location: 105372-106986 bp Feature: domain Description: rpsA Location: 1053 72-106986 bp Feature: gene Location: 107199-113165 bp Ori: KAA5495332.1 Feature: domain Description: DUF4011 Location: 108429-108942 bp Feature: domain Description: DUF4011 Location: 108429-108942 bp Feature: domain Description: DEXXQc_SF1 Location: 109281-109899 bp Feature: domain Description: DEXXQc_SF1 Location: 109281-109899 bp Feature: domain Description: DEXXQc_SF1 Location: 110526-111468 bp Feature: domain Description: DEXXQc_SF1 Location: 110526-111468 bp Feature: domain Description: TIGR00376 Location: 111600-111990 bp Feature: domain Description: TIGR003 76 Location: 111600-111990 bp Feature: domain Description: MTES_1575 Location: 112140-112425 bp Feature: domain Description: MTES_1575 Location: 112140-112425 bp Feature: domain Description: DUF3320 Location: 112674-112815 bp Feature: domain Description: DUF3 3 20 Location: 112674-112815 bp Feature: gene Location: 113162-114292 bp Ori: KAA5495333.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113483-114035 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113 483 -11403 5 bp Feature: gene Location: 114495-116657 bp Feature: gene Location: 116998-119187 bp Ori: KAA5495334.1 Feature: domain Description: GlnA3 Location: 117070-119185 bp Feature: domain Description: GlnA3 Location: 117070-119185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons, GlnA3 (COG3968)

Seq: VVYG01000008.1 Bacteroides caccae strain BIOML-A22 scaffold8_size240568, whole genome shotgun sequence (240600 bp)
Overview 1 RT 1: 33741-45087 bp Neighborhood of RT #1 [33741, 45125] Laminin_G_3 pfam08757 LRR_AMN1 RVT-DGRs Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 33741-34907 bp Feature: gene Location: 34917-41705 bp Ori: KAA5491596.1 Feature: domain Description: Laminin_G_3 Location: 37353-37734 bp Feature: domain Description: Laminin_G_3 Location: 37353-37734 bp Feature: domain Description: pfam08757 Location: 38529-38853 bp Feature: domain Description: pfam08757 Location: 38529-38853 bp Feature: domain Description: LRR_AMN1 Location: 39465-39909 bp Feature: domain Description: LRR_AMN1 Location: 394 65-39909 bp Feature: gene Location: 42138-43433 bp Ori: KAA5491597.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42354-42945 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 2354 -4 294 5 bp Feature: gene Location: 43435-43929 bp Feature: gene Location: 43980-45125 bp Ori: KAA5491599.1 Feature: domain Description: Arm-DNA-bind_5 Location: 44004-44250 bp Feature: domain Description: Arm-DNA-bind_5 Location: 4 4 004 -4 4 250 bp Feature: domain Description: Phage_int_SAM_5 Location: 44289-44574 bp Feature: domain Description: Phage_int_SAM_5 Location: 4 4 289-4 4 574 bp Feature: domain Description: INTN1_C_like Location: 44613-45087 bp Feature: domain Description: INTN1_C_like Location: 4 4 613-4 5087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), pfam08757 (CotH;CotH kinase protein), LRR_AMN1 (sd00034), RVT-DGRs, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)