myRT

myRT report for GCA_008572855.1_ASM857285v1

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Seq: VOMX01000016.1 Klebsiella pneumoniae strain 1988 NODE_16_length_114190_cov_35.176359, whole genome shotgun sequence (114190 bp)
Overview 1 RT 1: 86048-93234 bp Neighborhood of RT #1 [86048, 93234] FimC FimD RVT-UG4 EAL Feature: gene Location: 86048-86776 bp Feature: domain Description: FimC Location: 86096-86759 bp Feature: domain Description: FimC Location: 86096-86759 bp Feature: gene Location: 86808-89417 bp Feature: domain Description: FimD Location: 86865-89406 bp Feature: domain Description: FimD Location: 86865-89406 bp Feature: gene Location: 89417-91447 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 89825-90269 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 89825-90269 bp Feature: gene Location: 92084-92938 bp Feature: domain Description: EAL Location: 92768-92921 bp Feature: domain Description: EAL Location: 92768-92921 bp Feature: gene Location: 93028-93234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: VOMX01000075.1 Klebsiella pneumoniae strain 1988 NODE_75_length_3010_cov_4.740548, whole genome shotgun sequence (3010 bp)
Overview 1 RT 1: 2-1772 bp Neighborhood of RT #1 [2, 3007] RVT-Retrons AAA_15 Feature: gene Location: 2-622 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 182-623 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 182 -62 3 bp Feature: gene Location: 737-3007 bp Feature: domain Description: AAA_15 Location: 764-1772 bp Feature: domain Description: AAA_15 Location: 764-1772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175)