myRT

myRT report for GCA_008572915.1_ASM857291v1

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Seq: VOMY01000001.1 Klebsiella pneumoniae strain 1192 chromosome_1192, whole genome shotgun sequence (5246080 bp)
Overview 1 RT 1: 711275-718461 bp Neighborhood of RT #1 [711275, 718461] FimC FimD RVT-UG4 EAL Feature: gene Location: 711275-712003 bp Feature: domain Description: FimC Location: 711323-711986 bp Feature: domain Description: FimC Location: 71 1 323-71 1 986 bp Feature: gene Location: 712035-714644 bp Feature: domain Description: FimD Location: 712092-714633 bp Feature: domain Description: FimD Location: 71 2092-71 4633 bp Feature: gene Location: 714644-716674 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 715052-715496 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 71 5052-71 5496 bp Feature: gene Location: 717311-718165 bp Feature: domain Description: EAL Location: 717995-718148 bp Feature: domain Description: EAL Location: 71 7995-71 81 48 bp Feature: gene Location: 718255-718461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: VOMY01000004.1 Klebsiella pneumoniae strain 1192 pENT1192_81kb, whole genome shotgun sequence (81371 bp)
Overview 1 RT 1: 13282-17464 bp Neighborhood of RT #1 [13282, 17601] StbA Plasmid_stab_B RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 13282-14268 bp Feature: domain Description: StbA Location: 13297-14248 bp Feature: domain Description: StbA Location: 132 97-142 48 bp Feature: gene Location: 14272-14664 bp Feature: domain Description: Plasmid_stab_B Location: 14296-14506 bp Feature: domain Description: Plasmid_stab_B Location: 142 96-14506 bp Feature: gene Location: 14679-15707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14715-15315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14715-15315 bp Feature: gene Location: 15953-16927 bp Feature: domain Description: StbA Location: 15959-16904 bp Feature: domain Description: StbA Location: 15959-16904 bp Feature: gene Location: 16930-17601 bp Feature: domain Description: Plasmid_stab_B Location: 16945-17152 bp Feature: domain Description: Plasmid_stab_B Location: 16945-17152 bp Feature: domain Description: Plasmid_stab_B Location: 17257-17464 bp Feature: domain Description: Plasmid_stab_B Location: 172 57-17464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), Plasmid_stab_B (pfam10784), RVT-GII