myRT

myRT report for GCA_008573005.1_ASM857300v1

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Seq: VOND01000001.1 Klebsiella pneumoniae strain 1734 chromosome_1734, whole genome shotgun sequence (5448145 bp)
Overview 1 RT 1: 812285-817394 bp 2 RT 2: 1462383-1471182 bp 3 RT 3: 1550878-1556070 bp 4 RT 4: 1785062-1791532 bp 5 RT 5: 3116421-3121605 bp 6 RT 6: 3287652-3291504 bp Neighborhood of RT #1 [812285, 817402] INT_C_like_3 RVT-GII InsE PHA02517 Neighborhood of RT #2 [1462383, 1471349] Lipase_GDSL_2 RVT-GII RVT-GII PRK10276 Neighborhood of RT #3 [1550878, 1556120] IclR PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #4 [1785062, 1791546] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #5 [3116421, 3121613] umuC PRK10276 RVT-GII PinE Neighborhood of RT #6 [3287652, 3291504] umuC PRK10276 RVT-GII Feature: gene Location: 812285-812560 bp Feature: gene Location: 812835-813452 bp Feature: domain Description: INT_C_like_3 Location: 812883-813405 bp Feature: domain Description: INT_C_like_3 Location: 81 2883-81 3405 bp Feature: gene Location: 814212-815699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 814617-815307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 461 7-81 5307 bp Feature: gene Location: 816256-816552 bp Feature: domain Description: InsE Location: 816268-816502 bp Feature: domain Description: InsE Location: 81 6268-81 6502 bp Feature: gene Location: 816590-817402 bp Feature: domain Description: PHA02517 Location: 816596-817394 bp Feature: domain Description: PHA0251 7 Location: 81 6596-81 7394 bp Feature: gene Location: 1462383-1465532 bp Feature: domain Description: Lipase_GDSL_2 Location: 1465044-1465470 bp Feature: domain Description: Lipase_GDSL_2 Location: 1 465044-1 465470 bp Feature: gene Location: 1467098-1467310 bp Feature: gene Location: 1467723-1468796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1467732-1468404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 467732-1 468404 bp Feature: gene Location: 1469118-1470707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1469625-1470315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 469625-1 47031 5 bp Feature: gene Location: 1470782-1471021 bp Feature: gene Location: 1470978-1471349 bp Feature: domain Description: PRK10276 Location: 1471023-1471182 bp Feature: domain Description: PRK1 0276 Location: 1 471 023-1 471 1 82 bp Feature: gene Location: 1550878-1551663 bp Feature: domain Description: IclR Location: 1550905-1551631 bp Feature: domain Description: IclR Location: 1 550905-1 551 631 bp Feature: gene Location: 1551674-1551844 bp Feature: domain Description: PRK15440 Location: 1551677-1551824 bp Feature: domain Description: PRK1 5440 Location: 1 551 677-1 551 824 bp Feature: gene Location: 1552188-1553675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1552593-1553283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 552593-1 553283 bp Feature: gene Location: 1553766-1554788 bp Feature: domain Description: PRK15440 Location: 1553772-1554786 bp Feature: domain Description: PRK1 5440 Location: 1 553772-1 554786 bp Feature: gene Location: 1554828-1556120 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1554873-1556070 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1 554873-1 556070 bp Feature: gene Location: 1785062-1786486 bp Feature: domain Description: SbcB Location: 1785068-1786484 bp Feature: domain Description: SbcB Location: 1 785068-1 786484 bp Feature: gene Location: 1786661-1787830 bp Feature: domain Description: dacD Location: 1786670-1787825 bp Feature: domain Description: dacD Location: 1 786670-1 787825 bp Feature: gene Location: 1788347-1789834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1788752-1789442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 788752-1 789442 bp Feature: gene Location: 1789916-1790389 bp Feature: domain Description: PRK10016 Location: 1789919-1790378 bp Feature: domain Description: PRK1 001 6 Location: 1 78991 9-1 790378 bp Feature: gene Location: 1790473-1791546 bp Feature: domain Description: YccC Location: 1790494-1791532 bp Feature: domain Description: YccC Location: 1 790494-1 791 532 bp Feature: gene Location: 3116421-3117686 bp Feature: domain Description: umuC Location: 3116424-3117684 bp Feature: domain Description: umuC Location: 31 1 6424-31 1 7684 bp Feature: gene Location: 3117688-3118122 bp Feature: domain Description: PRK10276 Location: 3117706-3118117 bp Feature: domain Description: PRK1 0276 Location: 31 1 7706-31 1 81 1 7 bp Feature: gene Location: 3118187-3119671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3118589-3119279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 8589-31 1 9279 bp Feature: gene Location: 3119680-3119847 bp Feature: gene Location: 3121065-3121613 bp Feature: domain Description: PinE Location: 3121068-3121605 bp Feature: domain Description: PinE Location: 31 21 068-31 21 605 bp Feature: gene Location: 3287652-3288917 bp Feature: domain Description: umuC Location: 3287655-3288915 bp Feature: domain Description: umuC Location: 3287655-328891 5 bp Feature: gene Location: 3288920-3289339 bp Feature: domain Description: PRK10276 Location: 3288923-3289334 bp Feature: domain Description: PRK1 0276 Location: 3288923-3289334 bp Feature: gene Location: 3289418-3290902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3289820-3290510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3289820-329051 0 bp Feature: gene Location: 3291059-3291355 bp Feature: gene Location: 3291358-3291504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_3 (cd01192), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), Lipase_GDSL_2 (pfam13472), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), IclR (pfam01614), PRK15440 (L-rhamnonate dehydratase; Provisional), MFS_ExuT_GudP_like (cd17319), SbcB (COG2925)
dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PinE (COG1961)

Seq: VOND01000002.1 Klebsiella pneumoniae strain 1734 pKpVP_1734, whole genome shotgun sequence (224835 bp)
Overview 1 RT 1: 208465-212325 bp Neighborhood of RT #1 [208465, 212325] HHA RVT-GII INT_Cre_C Feature: gene Location: 208465-208716 bp Feature: domain Description: HHA Location: 208513-208696 bp Feature: domain Description: HHA Location: 2 08513-2 08696 bp Feature: gene Location: 208738-209208 bp Feature: gene Location: 209233-210720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209638-210328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 09638-2 1032 8 bp Feature: gene Location: 210806-211942 bp Feature: domain Description: INT_Cre_C Location: 211229-211883 bp Feature: domain Description: INT_Cre_C Location: 2 112 2 9-2 11883 bp Feature: gene Location: 212008-212325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: VOND01000003.1 Klebsiella pneumoniae strain 1734 pMDR_1734, whole genome shotgun sequence (99794 bp)
Overview 1 RT 1: 93915-98102 bp Neighborhood of RT #1 [93915, 98102] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 93915-94577 bp Feature: domain Description: Plasmid_stab_B Location: 93930-94137 bp Feature: domain Description: Plasmid_stab_B Location: 93 93 0-9413 7 bp Feature: domain Description: Plasmid_stab_B Location: 94242-94446 bp Feature: domain Description: Plasmid_stab_B Location: 94242-94446 bp Feature: gene Location: 94580-95554 bp Feature: domain Description: StbA Location: 94586-95531 bp Feature: domain Description: StbA Location: 94586-9553 1 bp Feature: gene Location: 95800-97287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96205-96895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96205-96895 bp Feature: gene Location: 97293-97460 bp Feature: gene Location: 97680-98102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII