myRT

myRT report for GCA_008573035.1_ASM857303v1

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Seq: VONE01000001.1 Klebsiella pneumoniae strain 646 chromosome_646, whole genome shotgun sequence (5444482 bp)
Overview 1 RT 1: 809859-814968 bp 2 RT 2: 1460762-1468766 bp 3 RT 3: 1548462-1553654 bp 4 RT 4: 1781581-1788051 bp 5 RT 5: 3112938-3118122 bp 6 RT 6: 3283992-3287844 bp Neighborhood of RT #1 [809859, 814976] INT_C_like_3 RVT-GII InsE PHA02517 Neighborhood of RT #2 [1460762, 1468933] Lipase_GDSL_2 RVT-GII RVT-GII PRK10276 Neighborhood of RT #3 [1548462, 1553704] IclR PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #4 [1781581, 1788065] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #5 [3112938, 3118130] umuC PRK10276 RVT-GII PinE Neighborhood of RT #6 [3283992, 3287844] umuC PRK10276 RVT-GII Feature: gene Location: 809859-810134 bp Feature: gene Location: 810409-811026 bp Feature: domain Description: INT_C_like_3 Location: 810457-810979 bp Feature: domain Description: INT_C_like_3 Location: 81 0457-81 0979 bp Feature: gene Location: 811786-813273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812191-812881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 21 91 -81 2881 bp Feature: gene Location: 813830-814126 bp Feature: domain Description: InsE Location: 813842-814076 bp Feature: domain Description: InsE Location: 81 3842-81 4076 bp Feature: gene Location: 814164-814976 bp Feature: domain Description: PHA02517 Location: 814170-814968 bp Feature: domain Description: PHA0251 7 Location: 81 41 70-81 4968 bp Feature: gene Location: 1460762-1461277 bp Feature: gene Location: 1461315-1463033 bp Feature: domain Description: Lipase_GDSL_2 Location: 1462599-1462998 bp Feature: domain Description: Lipase_GDSL_2 Location: 1 462599-1 462998 bp Feature: gene Location: 1464895-1466382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1465300-1465990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 465300-1 465990 bp Feature: gene Location: 1466804-1468291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1467209-1467899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 467209-1 467899 bp Feature: gene Location: 1468366-1468605 bp Feature: gene Location: 1468562-1468933 bp Feature: domain Description: PRK10276 Location: 1468607-1468766 bp Feature: domain Description: PRK1 0276 Location: 1 468607-1 468766 bp Feature: gene Location: 1548462-1549247 bp Feature: domain Description: IclR Location: 1548489-1549215 bp Feature: domain Description: IclR Location: 1 548489-1 54921 5 bp Feature: gene Location: 1549258-1549428 bp Feature: domain Description: PRK15440 Location: 1549261-1549408 bp Feature: domain Description: PRK1 5440 Location: 1 549261 -1 549408 bp Feature: gene Location: 1549772-1551259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1550177-1550867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5501 77-1 550867 bp Feature: gene Location: 1551350-1552372 bp Feature: domain Description: PRK15440 Location: 1551356-1552370 bp Feature: domain Description: PRK1 5440 Location: 1 551 356-1 552370 bp Feature: gene Location: 1552412-1553704 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1552457-1553654 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1 552457-1 553654 bp Feature: gene Location: 1781581-1783005 bp Feature: domain Description: SbcB Location: 1781587-1783003 bp Feature: domain Description: SbcB Location: 1 781 587-1 783003 bp Feature: gene Location: 1783180-1784349 bp Feature: domain Description: dacD Location: 1783189-1784344 bp Feature: domain Description: dacD Location: 1 7831 89-1 784344 bp Feature: gene Location: 1784866-1786353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1785271-1785961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 785271 -1 785961 bp Feature: gene Location: 1786435-1786908 bp Feature: domain Description: PRK10016 Location: 1786438-1786897 bp Feature: domain Description: PRK1 001 6 Location: 1 786438-1 786897 bp Feature: gene Location: 1786992-1788065 bp Feature: domain Description: YccC Location: 1787013-1788051 bp Feature: domain Description: YccC Location: 1 78701 3-1 788051 bp Feature: gene Location: 3112938-3114203 bp Feature: domain Description: umuC Location: 3112941-3114201 bp Feature: domain Description: umuC Location: 31 1 2941 -31 1 4201 bp Feature: gene Location: 3114205-3114639 bp Feature: domain Description: PRK10276 Location: 3114223-3114634 bp Feature: domain Description: PRK1 0276 Location: 31 1 4223-31 1 4634 bp Feature: gene Location: 3114704-3116188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3115106-3115796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 51 06-31 1 5796 bp Feature: gene Location: 3116197-3116364 bp Feature: gene Location: 3117582-3118130 bp Feature: domain Description: PinE Location: 3117585-3118122 bp Feature: domain Description: PinE Location: 31 1 7585-31 1 81 22 bp Feature: gene Location: 3283992-3285257 bp Feature: domain Description: umuC Location: 3283995-3285255 bp Feature: domain Description: umuC Location: 3283995-3285255 bp Feature: gene Location: 3285260-3285679 bp Feature: domain Description: PRK10276 Location: 3285263-3285674 bp Feature: domain Description: PRK1 0276 Location: 3285263-3285674 bp Feature: gene Location: 3285758-3287242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3286160-3286850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32861 60-3286850 bp Feature: gene Location: 3287399-3287695 bp Feature: gene Location: 3287698-3287844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_3 (cd01192), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), Lipase_GDSL_2 (pfam13472), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), IclR (pfam01614), PRK15440 (L-rhamnonate dehydratase; Provisional), MFS_ExuT_GudP_like (cd17319), SbcB (COG2925)
dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PinE (COG1961)

Seq: VONE01000002.1 Klebsiella pneumoniae strain 646 pKpVP_646, whole genome shotgun sequence (223140 bp)
Overview 1 RT 1: 206770-210630 bp Neighborhood of RT #1 [206770, 210630] HHA RVT-GII INT_Cre_C Feature: gene Location: 206770-207021 bp Feature: domain Description: HHA Location: 206818-207001 bp Feature: domain Description: HHA Location: 2 06818-2 07001 bp Feature: gene Location: 207043-207513 bp Feature: gene Location: 207538-209025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207943-208633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 07943-2 08633 bp Feature: gene Location: 209111-210247 bp Feature: domain Description: INT_Cre_C Location: 209534-210188 bp Feature: domain Description: INT_Cre_C Location: 2 09534-2 10188 bp Feature: gene Location: 210313-210630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: VONE01000003.1 Klebsiella pneumoniae strain 646 pMDR_646, whole genome shotgun sequence (165413 bp)
Overview 1 RT 1: 159534-163725 bp Neighborhood of RT #1 [159534, 163742] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 159534-160196 bp Feature: domain Description: Plasmid_stab_B Location: 159549-159756 bp Feature: domain Description: Plasmid_stab_B Location: 159549-159756 bp Feature: domain Description: Plasmid_stab_B Location: 159861-160065 bp Feature: domain Description: Plasmid_stab_B Location: 159861-160065 bp Feature: gene Location: 160199-161173 bp Feature: domain Description: StbA Location: 160205-161150 bp Feature: domain Description: StbA Location: 160205-161150 bp Feature: gene Location: 161419-162906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161824-162514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161824-162514 bp Feature: gene Location: 162912-163079 bp Feature: gene Location: 163311-163742 bp Feature: domain Description: PRK10276 Location: 163362-163725 bp Feature: domain Description: PRK10276 Location: 163 3 62-163 725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)