myRT

myRT report for GCA_008573055.1_ASM857305v1

Download annotations/find similar RTs

Seq: VONF01000001.1 Klebsiella pneumoniae strain 494 chromosome_494, whole genome shotgun sequence (5443212 bp)
Overview 1 RT 1: 808413-813522 bp 2 RT 2: 1455359-1467313 bp 3 RT 3: 1547009-1552201 bp 4 RT 4: 1780128-1786598 bp 5 RT 5: 3111487-3116671 bp 6 RT 6: 3282718-3286570 bp Neighborhood of RT #1 [808413, 813530] INT_C_like_3 RVT-GII InsE PHA02517 Neighborhood of RT #2 [1455359, 1467480] Phage-tail_3 Lipase_GDSL_2 RVT-GII RVT-GII PRK10276 Neighborhood of RT #3 [1547009, 1552251] IclR PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #4 [1780128, 1786612] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #5 [3111487, 3116679] umuC PRK10276 RVT-GII PinE Neighborhood of RT #6 [3282718, 3286570] umuC PRK10276 RVT-GII Feature: gene Location: 808413-808688 bp Feature: gene Location: 808963-809580 bp Feature: domain Description: INT_C_like_3 Location: 809011-809533 bp Feature: domain Description: INT_C_like_3 Location: 80901 1 -809533 bp Feature: gene Location: 810340-811827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810745-811435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 0745-81 1 435 bp Feature: gene Location: 812384-812680 bp Feature: domain Description: InsE Location: 812396-812630 bp Feature: domain Description: InsE Location: 81 2396-81 2630 bp Feature: gene Location: 812718-813530 bp Feature: domain Description: PHA02517 Location: 812724-813522 bp Feature: domain Description: PHA0251 7 Location: 81 2724-81 3522 bp Feature: gene Location: 1455359-1458436 bp Feature: domain Description: Phage-tail_3 Location: 1457591-1458065 bp Feature: domain Description: Phage-tail_3 Location: 1 457591 -1 458065 bp Feature: gene Location: 1458512-1461661 bp Feature: domain Description: Lipase_GDSL_2 Location: 1461173-1461599 bp Feature: domain Description: Lipase_GDSL_2 Location: 1 461 1 73-1 461 599 bp Feature: gene Location: 1463442-1464929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463847-1464537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 463847-1 464537 bp Feature: gene Location: 1465351-1466838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1465756-1466446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 465756-1 466446 bp Feature: gene Location: 1466913-1467152 bp Feature: gene Location: 1467109-1467480 bp Feature: domain Description: PRK10276 Location: 1467154-1467313 bp Feature: domain Description: PRK1 0276 Location: 1 4671 54-1 46731 3 bp Feature: gene Location: 1547009-1547794 bp Feature: domain Description: IclR Location: 1547036-1547762 bp Feature: domain Description: IclR Location: 1 547036-1 547762 bp Feature: gene Location: 1547805-1547975 bp Feature: domain Description: PRK15440 Location: 1547808-1547955 bp Feature: domain Description: PRK1 5440 Location: 1 547808-1 547955 bp Feature: gene Location: 1548319-1549806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548724-1549414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 548724-1 54941 4 bp Feature: gene Location: 1549897-1550919 bp Feature: domain Description: PRK15440 Location: 1549903-1550917 bp Feature: domain Description: PRK1 5440 Location: 1 549903-1 55091 7 bp Feature: gene Location: 1550959-1552251 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1551004-1552201 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1 551 004-1 552201 bp Feature: gene Location: 1780128-1781552 bp Feature: domain Description: SbcB Location: 1780134-1781550 bp Feature: domain Description: SbcB Location: 1 7801 34-1 781 550 bp Feature: gene Location: 1781727-1782896 bp Feature: domain Description: dacD Location: 1781736-1782891 bp Feature: domain Description: dacD Location: 1 781 736-1 782891 bp Feature: gene Location: 1783413-1784900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1783818-1784508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 78381 8-1 784508 bp Feature: gene Location: 1784982-1785455 bp Feature: domain Description: PRK10016 Location: 1784985-1785444 bp Feature: domain Description: PRK1 001 6 Location: 1 784985-1 785444 bp Feature: gene Location: 1785539-1786612 bp Feature: domain Description: YccC Location: 1785560-1786598 bp Feature: domain Description: YccC Location: 1 785560-1 786598 bp Feature: gene Location: 3111487-3112752 bp Feature: domain Description: umuC Location: 3111490-3112750 bp Feature: domain Description: umuC Location: 31 1 1 490-31 1 2750 bp Feature: gene Location: 3112754-3113188 bp Feature: domain Description: PRK10276 Location: 3112772-3113183 bp Feature: domain Description: PRK1 0276 Location: 31 1 2772-31 1 31 83 bp Feature: gene Location: 3113253-3114737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3113655-3114345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 3655-31 1 4345 bp Feature: gene Location: 3114746-3114913 bp Feature: gene Location: 3116131-3116679 bp Feature: domain Description: PinE Location: 3116134-3116671 bp Feature: domain Description: PinE Location: 31 1 61 34-31 1 6671 bp Feature: gene Location: 3282718-3283983 bp Feature: domain Description: umuC Location: 3282721-3283981 bp Feature: domain Description: umuC Location: 3282721 -3283981 bp Feature: gene Location: 3283986-3284405 bp Feature: domain Description: PRK10276 Location: 3283989-3284400 bp Feature: domain Description: PRK1 0276 Location: 3283989-3284400 bp Feature: gene Location: 3284484-3285968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3284886-3285576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3284886-3285576 bp Feature: gene Location: 3286125-3286421 bp Feature: gene Location: 3286424-3286570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_3 (cd01192), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), Phage-tail_3 (pfam13550), Lipase_GDSL_2 (pfam13472), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), IclR (pfam01614), PRK15440 (L-rhamnonate dehydratase; Provisional), MFS_ExuT_GudP_like (cd17319)
SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PinE (COG1961)

Seq: VONF01000002.1 Klebsiella pneumoniae strain 494 pKpVP_494, whole genome shotgun sequence (221812 bp)
Overview 1 RT 1: 205442-209302 bp Neighborhood of RT #1 [205442, 209302] HHA RVT-GII INT_Cre_C Feature: gene Location: 205442-205693 bp Feature: domain Description: HHA Location: 205490-205673 bp Feature: domain Description: HHA Location: 2 05490-2 05673 bp Feature: gene Location: 205715-206185 bp Feature: gene Location: 206210-207697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206615-207305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 06615-2 07305 bp Feature: gene Location: 207783-208919 bp Feature: domain Description: INT_Cre_C Location: 208206-208860 bp Feature: domain Description: INT_Cre_C Location: 2 082 06-2 08860 bp Feature: gene Location: 208985-209302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)