myRT

myRT report for GCA_008579445.1_ASM857944v1

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Seq: BHVQ01000010.1 Microcystis aeruginosa NIES-2521 DNA, contig_10, whole genome shotgun sequence (100907 bp)
Overview 1 RT 1: 72867-78686 bp Neighborhood of RT #1 [72867, 78686] PLN00049 RVT_N RVT-GII GIIM McrA Feature: gene Location: 72867-73100 bp Feature: gene Location: 73130-74368 bp Feature: domain Description: PLN00049 Location: 73217-74282 bp Feature: domain Description: PLN00049 Location: 7321 7-74282 bp Feature: gene Location: 74480-76324 bp Feature: domain Description: RVT_N Location: 74546-74789 bp Feature: domain Description: RVT_N Location: 74546-74789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74834-75506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74834-75506 bp Feature: domain Description: GIIM Note: maturase Location: 75605-75827 bp Feature: domain Description: GIIM Note: maturase Location: 75605-75827 bp Feature: domain Description: McrA Location: 75959-76211 bp Feature: domain Description: McrA Location: 75959-7621 1 bp Feature: gene Location: 76620-76826 bp Feature: gene Location: 78051-78686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLN00049 (carboxyl-terminal processing protease; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: BHVQ01000011.1 Microcystis aeruginosa NIES-2521 DNA, contig_11, whole genome shotgun sequence (93951 bp)
Overview 1 RT 1: 37079-42731 bp Neighborhood of RT #1 [37079, 42742] DUF2283 InsQ RVT_N RVT-GII GIIM McrA DUF4258 FtsW Feature: gene Location: 37079-37354 bp Feature: domain Description: DUF2283 Location: 37085-37226 bp Feature: domain Description: DUF2 2 83 Location: 37085-372 2 6 bp Feature: gene Location: 37406-38083 bp Feature: domain Description: InsQ Location: 37415-38000 bp Feature: domain Description: InsQ Location: 37415-38000 bp Feature: gene Location: 38625-40385 bp Feature: domain Description: RVT_N Location: 38685-38931 bp Feature: domain Description: RVT_N Location: 38685-38931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38973-39642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38973-39642 bp Feature: domain Description: GIIM Note: maturase Location: 39741-39975 bp Feature: domain Description: GIIM Note: maturase Location: 39741-39975 bp Feature: domain Description: McrA Location: 40053-40353 bp Feature: domain Description: McrA Location: 40053-40353 bp Feature: gene Location: 40994-41284 bp Feature: domain Description: DUF4258 Location: 41009-41219 bp Feature: domain Description: DUF42 58 Location: 41009-412 19 bp Feature: gene Location: 41462-42742 bp Feature: domain Description: FtsW Location: 41537-42731 bp Feature: domain Description: FtsW Location: 41537-42 731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2283 (pfam10049), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF4258 (pfam14076), FtsW (COG0772)

Seq: BHVQ01000026.1 Microcystis aeruginosa NIES-2521 DNA, contig_26, whole genome shotgun sequence (56019 bp)
Overview 1 RT 1: 3929-8853 bp Neighborhood of RT #1 [3929, 8853] RlpA RVT_N RVT-GII GIIM McrA Feature: gene Location: 3929-4666 bp Feature: domain Description: RlpA Location: 4295-4661 bp Feature: domain Description: RlpA Location: 4295-4661 bp Feature: gene Location: 5615-5752 bp Feature: gene Location: 5850-7694 bp Feature: domain Description: RVT_N Location: 5916-6159 bp Feature: domain Description: RVT_N Location: 5916-6159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6204-6876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6204-6876 bp Feature: domain Description: GIIM Note: maturase Location: 6975-7197 bp Feature: domain Description: GIIM Note: maturase Location: 6975-7197 bp Feature: domain Description: McrA Location: 7338-7581 bp Feature: domain Description: McrA Location: 73 3 8-7581 bp Feature: gene Location: 7777-7980 bp Feature: gene Location: 8650-8853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlpA (COG0797), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: BHVQ01000039.1 Microcystis aeruginosa NIES-2521 DNA, contig_39, whole genome shotgun sequence (43577 bp)
Overview 1 RT 1: 5808-10266 bp Neighborhood of RT #1 [5808, 10301] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 5808-6023 bp Feature: gene Location: 6832-7458 bp Feature: gene Location: 7940-8917 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8147-8753 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 814 7-8753 bp Feature: gene Location: 8920-10026 bp Feature: domain Description: Cas1_I-II-III Location: 9031-9988 bp Feature: domain Description: Cas1_I-II-III Location: 9031-9988 bp Feature: gene Location: 10122-10301 bp Feature: domain Description: Cas2_I_II_III Location: 10128-10266 bp Feature: domain Description: Cas2_I_II_III Location: 10128-10266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: BHVQ01000105.1 Microcystis aeruginosa NIES-2521 DNA, contig_105, whole genome shotgun sequence (2619 bp)
Overview 1 RT 1: 78-1815 bp Neighborhood of RT #1 [78, 1925] RVT_N RVT-GII GIIM McrA Feature: gene Location: 78-1925 bp Feature: domain Description: RVT_N Location: 144-387 bp Feature: domain Description: RVT_N Location: 144-387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1104 bp Feature: domain Description: GIIM Note: maturase Location: 1209-1431 bp Feature: domain Description: GIIM Note: maturase Location: 1209-1431 bp Feature: domain Description: McrA Location: 1572-1815 bp Feature: domain Description: McrA Location: 15 72-1815 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: BHVQ01000106.1 Microcystis aeruginosa NIES-2521 DNA, contig_106, whole genome shotgun sequence (2612 bp)
Overview 1 RT 1: 78-2491 bp Neighborhood of RT #1 [78, 2491] RVT_N RVT-GII GIIM McrA Feature: gene Location: 78-1922 bp Feature: domain Description: RVT_N Location: 144-387 bp Feature: domain Description: RVT_N Location: 144-387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1104 bp Feature: domain Description: GIIM Note: maturase Location: 1203-1410 bp Feature: domain Description: GIIM Note: maturase Location: 1203-1410 bp Feature: domain Description: McrA Location: 1542-1812 bp Feature: domain Description: McrA Location: 1542-1812 bp Feature: gene Location: 2291-2491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: BHVQ01000120.1 Microcystis aeruginosa NIES-2521 DNA, contig_120, whole genome shotgun sequence (1204 bp)
Overview 1 RT 1: 696-1203 bp Neighborhood of RT #1 [696, 1202] RVT_N RVT-GII Feature: gene Location: 696-1202 bp Feature: domain Description: RVT_N Location: 762-1005 bp Feature: domain Description: RVT_N Location: 7 62-1005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1050-1203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1050-1203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: BHVQ01000133.1 Microcystis aeruginosa NIES-2521 DNA, contig_133, whole genome shotgun sequence (785 bp)
Overview 1 RT 1: 3-642 bp Neighborhood of RT #1 [3, 782] RVT-GII Feature: gene Location: 3-782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BHVQ01000163.1 Microcystis aeruginosa NIES-2521 DNA, contig_163, whole genome shotgun sequence (294 bp)
Overview 1 RT 1: 3-294 bp Neighborhood of RT #1 [3, 293] RVT-GII Feature: gene Location: 3-293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-29 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII