myRT

myRT report for GCA_008629775.1_ASM862977v1

Download annotations/find similar RTs

Seq: VWQB01000105.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_106, whole genome shotgun sequence (2070 bp)
Overview 1 RT 1: 1-2067 bp Neighborhood of RT #1 [1, 2067] RVT-CRISPR-like Feature: gene Location: 1-942 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 19-439 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 9-439 bp Feature: gene Location: 1027-1428 bp Feature: gene Location: 1588-2067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000126.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_127, whole genome shotgun sequence (1113 bp)
Overview 1 RT 1: 151-625 bp Neighborhood of RT #1 [151, 1110] RVT-CRISPR-like Feature: gene Location: 151-1110 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 187-625 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 187-62 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000152.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_155, whole genome shotgun sequence (1407 bp)
Overview 1 RT 1: 2-1394 bp Neighborhood of RT #1 [2, 1405] RVT-CRISPR-like Feature: gene Location: 2-1405 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1007-1394 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1007-13 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000167.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_170, whole genome shotgun sequence (250 bp)
Overview 1 RT 1: 2-176 bp Neighborhood of RT #1 [2, 247] RVT-UG19 Feature: gene Location: 2-247 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 56-176 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 56-176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19

Seq: VWQB01000169.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_172, whole genome shotgun sequence (200 bp)
Overview 1 RT 1: 2-197 bp Neighborhood of RT #1 [2, 199] RVT-CRISPR-like Feature: gene Location: 2-199 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 116-197 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 116-197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000186.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_189, whole genome shotgun sequence (397 bp)
Overview 1 RT 1: 163-385 bp Neighborhood of RT #1 [163, 396] RVT-CRISPR-like Feature: gene Location: 163-396 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 331-385 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 331-385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000195.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_198, whole genome shotgun sequence (430 bp)
Overview 1 RT 1: 1-370 bp Neighborhood of RT #1 [1, 429] RVT-CRISPR-like Feature: gene Location: 1-429 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 103-370 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 103-37 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000235.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_240, whole genome shotgun sequence (570 bp)
Overview 1 RT 1: 3-189 bp Neighborhood of RT #1 [3, 569] RVT-CRISPR-like Feature: gene Location: 3-569 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 48-189 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 48 -18 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000236.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_241, whole genome shotgun sequence (621 bp)
Overview 1 RT 1: 2-578 bp Neighborhood of RT #1 [2, 619] RVT-UNC Feature: gene Location: 2-619 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 53-578 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 53-578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: VWQB01000253.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_258, whole genome shotgun sequence (409 bp)
Overview 1 RT 1: 81-360 bp Neighborhood of RT #1 [81, 407] RVT-GII Feature: gene Location: 81-407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165-360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165-360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWQB01000361.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_367, whole genome shotgun sequence (463 bp)
Overview 1 RT 1: 97-355 bp Neighborhood of RT #1 [97, 462] RVT-CRISPR-like Feature: gene Location: 97-462 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 103-355 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 103-355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000378.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_384, whole genome shotgun sequence (578 bp)
Overview 1 RT 1: 3-312 bp Neighborhood of RT #1 [3, 575] RVT-CRISPR-like Feature: gene Location: 3-575 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 45-312 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 45-312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000447.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_453, whole genome shotgun sequence (462 bp)
Overview 1 RT 1: 2-449 bp Neighborhood of RT #1 [2, 460] RVT-UNC Feature: gene Location: 2-460 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 179-449 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 179-449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13/RVT-DGRs/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: VWQB01000491.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_498, whole genome shotgun sequence (336 bp)
Overview 1 RT 1: 2-305 bp Neighborhood of RT #1 [2, 334] RVT-CRISPR-like Feature: gene Location: 2-334 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 110-305 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 110-305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000495.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_502, whole genome shotgun sequence (575 bp)
Overview 1 RT 1: 1-568 bp Neighborhood of RT #1 [1, 573] RT_nLTR_like RVT-GII Feature: gene Location: 1-198 bp Feature: domain Description: RT_nLTR_like Location: 76-196 bp Feature: domain Description: RT_nLTR_like Location: 76-196 bp Feature: gene Location: 202-573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_nLTR_like (cd01650), RVT-GII

Seq: VWQB01000516.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_523, whole genome shotgun sequence (302 bp)
Overview 1 RT 1: 1-199 bp Neighborhood of RT #1 [1, 300] RVT-CRISPR-like Feature: gene Location: 1-300 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 46-199 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 46-199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQB01000528.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_535, whole genome shotgun sequence (619 bp)
Overview 1 RT 1: 3-585 bp Neighborhood of RT #1 [3, 617] RVT-UG11 Feature: gene Location: 3-617 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 375-585 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 375-585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11

Seq: VWQB01000552.1 Pseudomonas aeruginosa strain L35 L35_L1.R1.clean_(paired)_contig_559, whole genome shotgun sequence (470 bp)
Overview 1 RT 1: 2-365 bp Neighborhood of RT #1 [2, 469] RVT-CRISPR-like Feature: gene Location: 2-469 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 62-365 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 62-365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR