myRT

myRT report for GCA_008630045.1_ASM863004v1

Download annotations/find similar RTs

Seq: VWQM01000162.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_167, whole genome shotgun sequence (1754 bp)
Overview 1 RT 1: 137-818 bp Neighborhood of RT #1 [137, 829] RVT-UNC Feature: gene Location: 137-829 bp Ori: KAA5590348.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 218-818 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 21 8-81 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: VWQM01000219.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_224, whole genome shotgun sequence (481 bp)
Overview 1 RT 1: 1-214 bp Neighborhood of RT #1 [1, 439] RVT-UNC Feature: gene Location: 1-439 bp Ori: KAA5589313.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 70-214 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 70-2 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-UG28/RVT-UG7/RVT-UG27(RVT-UNC)

Seq: VWQM01000199.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_204, whole genome shotgun sequence (398 bp)
Overview 1 RT 1: 1-379 bp Neighborhood of RT #1 [1, 398] RVT-UNC Feature: gene Location: 1-398 bp Ori: KAA5589596.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 193-379 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 193 -3 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG16/RVT-GII/RVT-UG8/RVT-UG17(RVT-UNC)

Seq: VWQM01000094.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_99, whole genome shotgun sequence (428 bp)
Overview 1 RT 1: 1-319 bp Neighborhood of RT #1 [1, 338] RVT-CRISPR-like Feature: gene Location: 1-338 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 79-319 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 79-319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQM01000089.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_93, whole genome shotgun sequence (845 bp)
Overview 1 RT 1: 48-171 bp Neighborhood of RT #1 [48, 818] RVT-CRISPR-like Feature: gene Location: 48-818 bp Ori: KAA5592355.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 57-171 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5 7-171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQM01000406.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_414, whole genome shotgun sequence (405 bp)
Overview 1 RT 1: 1-271 bp Neighborhood of RT #1 [1, 401] RVT-UNC Feature: gene Location: 1-401 bp Ori: KAA5586878.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 70-271 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 70-271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17/RVT-DGRs/RVT-UG7/RVT-UG9(RVT-UNC)

Seq: VWQM01000207.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_212, whole genome shotgun sequence (424 bp)
Overview 1 RT 1: 1-376 bp Neighborhood of RT #1 [1, 424] RVT-CRISPR-like Feature: gene Location: 1-424 bp Ori: KAA5589435.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4-376 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4-37 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQM01000343.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_349, whole genome shotgun sequence (414 bp)
Overview 1 RT 1: 1-310 bp Neighborhood of RT #1 [1, 414] RVT-UNC Feature: gene Location: 1-414 bp Ori: KAA5587406.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 43-310 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 43-310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13/RVT-GII/RVT-UG2(RVT-UNC)

Seq: VWQM01000104.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_109, whole genome shotgun sequence (418 bp)
Overview 1 RT 1: 1-415 bp Neighborhood of RT #1 [1, 418] RVT-CRISPR-like Feature: gene Location: 1-418 bp Ori: KAA5591929.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10-415 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10-415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQM01000179.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_184, whole genome shotgun sequence (624 bp)
Overview 1 RT 1: 347-581 bp Neighborhood of RT #1 [347, 624] RVT-CRISPR-like Feature: gene Location: 347-624 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 353-581 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 353-581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQM01000131.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_136, whole genome shotgun sequence (539 bp)
Overview 1 RT 1: 298-499 bp Neighborhood of RT #1 [298, 539] RVT-GII Feature: gene Location: 298-539 bp Ori: KAA5591120.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWQM01000254.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_260, whole genome shotgun sequence (876 bp)
Overview 1 RT 1: 37-778 bp Neighborhood of RT #1 [37, 876] RVT-CRISPR-like Feature: gene Location: 37-876 bp Ori: KAA5588664.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 241-778 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 241-778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQM01000054.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_56, whole genome shotgun sequence (686 bp)
Overview 1 RT 1: 1-271 bp Neighborhood of RT #1 [1, 686] RVT-CRISPR-like Feature: gene Location: 1-686 bp Ori: KAA5593060.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 73-271 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 73-271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQM01000573.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_582, whole genome shotgun sequence (415 bp)
Overview 1 RT 1: 1-169 bp Neighborhood of RT #1 [1, 412] RVT-CRISPR-like Feature: gene Location: 1-412 bp Ori: KAA5586514.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 25-169 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 25-169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQM01000229.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_234, whole genome shotgun sequence (381 bp)
Overview 1 RT 1: 1-379 bp Neighborhood of RT #1 [1, 380] RVT-UNC Feature: gene Location: 1-380 bp Ori: KAA5589197.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 133-379 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 133-379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: VWQM01000064.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_66, whole genome shotgun sequence (4062 bp)
Overview 1 RT 1: 246-3986 bp Neighborhood of RT #1 [246, 4062] PRE_C2HC R1-I-EN RVT-CRISPR-like Feature: gene Location: 246-1285 bp Ori: KAA5592773.1 Feature: domain Description: PRE_C2HC Location: 1074-1272 bp Feature: domain Description: PRE_C2HC Location: 1074-1272 bp Feature: gene Location: 1913-2581 bp Ori: KAA5592774.1 Feature: domain Description: R1-I-EN Location: 1964-2582 bp Feature: domain Description: R1-I-EN Location: 1964-2582 bp Feature: gene Location: 2903-4062 bp Ori: KAA5592775.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3470-3986 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3470-3986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRE_C2HC (smart00596), R1-I-EN (cd09077), RVT-CRISPR

Seq: VWQM01000300.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_306, whole genome shotgun sequence (368 bp)
Overview 1 RT 1: 1-340 bp Neighborhood of RT #1 [1, 368] RVT-GII Feature: gene Location: 1-368 bp Ori: KAA5588071.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91-340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91-340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWQM01000049.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_51, whole genome shotgun sequence (2251 bp)
Overview 1 RT 1: 1-1362 bp Neighborhood of RT #1 [1, 1986] RVT-CRISPR-like R1-I-EN Feature: gene Location: 1-554 bp Ori: KAA5593066.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 211-550 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 211-550 bp Feature: gene Location: 684-1986 bp Ori: KAA5593067.1 Feature: domain Description: R1-I-EN Location: 738-1362 bp Feature: domain Description: R1-I-EN Location: 738-1362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, R1-I-EN (cd09077)

Seq: VWQM01000627.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_636, whole genome shotgun sequence (461 bp)
Overview 1 RT 1: 1-454 bp Neighborhood of RT #1 [1, 460] RVT-GII Feature: gene Location: 1-460 bp Ori: KAA5586452.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196-454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19 6-454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWQM01000423.1 Pseudomonas aeruginosa strain L14 L14_L1.R1.clean_(paired)_contig_431, whole genome shotgun sequence (560 bp)
Overview 1 RT 1: 1-475 bp Neighborhood of RT #1 [1, 560] RVT-UNC Feature: gene Location: 1-560 bp Ori: KAA5586822.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 61-475 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 61-475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28/RVT-CRISPR/RVT-GII(RVT-UNC)