myRT

myRT report for GCA_008630085.1_ASM863008v1

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Seq: VWQS01000020.1 Klebsiella pneumoniae strain P41 P41_L1.R1.clean_(paired)_contig_20, whole genome shotgun sequence (361077 bp)
Overview 1 RT 1: 321015-330946 bp Neighborhood of RT #1 [321015, 331050] TIGR02687 YeeA YeeA RVT-UG5 nitrilase YeeA YeeA Feature: gene Location: 321015-323618 bp Feature: domain Description: TIGR02687 Location: 321033-323586 bp Feature: domain Description: TIGR02687 Location: 321 033-323586 bp Feature: gene Location: 323836-325611 bp Feature: domain Description: YeeA Location: 323872-324223 bp Feature: domain Description: YeeA Location: 323872-324223 bp Feature: domain Description: YeeA Location: 324538-325543 bp Feature: domain Description: YeeA Location: 324538-325543 bp Feature: gene Location: 325614-328613 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 326076-326562 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 326076-326562 bp Feature: domain Description: nitrilase Location: 327801-328521 bp Feature: domain Description: nitrilase Location: 327801 -328521 bp Feature: gene Location: 328644-329093 bp Feature: gene Location: 329116-331050 bp Feature: domain Description: YeeA Location: 329755-330466 bp Feature: domain Description: YeeA Location: 329755-330466 bp Feature: domain Description: YeeA Location: 330622-330946 bp Feature: domain Description: YeeA Location: 330622-330946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02687 (TIGR02687 family protein), YeeA (COG1002), RVT-UG5, nitrilase (cl11424)

Seq: VWQS01000056.1 Klebsiella pneumoniae strain P41 P41_L1.R1.clean_(paired)_contig_56, whole genome shotgun sequence (4183 bp)
Overview 1 RT 1: 1082-3295 bp Neighborhood of RT #1 [1082, 3295] RVT-Retrons Feature: gene Location: 1082-1408 bp Feature: gene Location: 1483-1779 bp Feature: gene Location: 1938-2612 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1965-2457 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1965-2 457 bp Feature: gene Location: 2887-3156 bp Feature: gene Location: 3158-3295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: VWQS01000087.1 Klebsiella pneumoniae strain P41 P41_L1.R1.clean_(paired)_contig_87, whole genome shotgun sequence (20858 bp)
Overview 1 RT 1: 5496-10542 bp Neighborhood of RT #1 [5496, 10718] proA RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 5496-6749 bp Feature: domain Description: proA Location: 5523-6714 bp Feature: domain Description: proA Location: 5523 -6714 bp Feature: gene Location: 6845-7018 bp Feature: gene Location: 7390-8328 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7489-8086 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7489-8086 bp Feature: gene Location: 8330-9958 bp Feature: domain Description: COG3950 Location: 8513-9686 bp Feature: domain Description: COG3 950 Location: 8513 -9686 bp Feature: gene Location: 9942-10718 bp Feature: domain Description: TIGR02646 Location: 10014-10542 bp Feature: domain Description: TIGR02646 Location: 10014-10542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)