myRT

myRT report for GCA_008630125.1_ASM863012v1

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Seq: VWQR01000010.1 Klebsiella pneumoniae strain P42 P42_L1.R1.clean_(paired)_contig_10, whole genome shotgun sequence (321095 bp)
Overview 1 RT 1: 265277-272463 bp Neighborhood of RT #1 [265277, 272463] FimC FimD RVT-UG4 EAL Feature: gene Location: 265277-266005 bp Feature: domain Description: FimC Location: 265325-265988 bp Feature: domain Description: FimC Location: 265325-265988 bp Feature: gene Location: 266037-268646 bp Feature: domain Description: FimD Location: 266094-268635 bp Feature: domain Description: FimD Location: 266094-268635 bp Feature: gene Location: 268646-270676 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 269054-269498 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 269054-269498 bp Feature: gene Location: 271313-272134 bp Feature: domain Description: EAL Location: 271997-272111 bp Feature: domain Description: EAL Location: 271 997-2721 1 1 bp Feature: gene Location: 272257-272463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: VWQR01000126.1 Klebsiella pneumoniae strain P42 P42_L1.R1.clean_(paired)_contig_127, whole genome shotgun sequence (772 bp)
Overview 1 RT 1: 93-357 bp Neighborhood of RT #1 [93, 770] RVT-CRISPR-like Feature: gene Location: 93-770 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 105-357 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 105-357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWQR01000201.1 Klebsiella pneumoniae strain P42 P42_L1.R1.clean_(paired)_contig_203, whole genome shotgun sequence (308 bp)
Overview 1 RT 1: 2-242 bp Neighborhood of RT #1 [2, 307] RVT-CRISPR-like Feature: gene Location: 2-307 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5-242 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5-242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR