myRT

myRT report for GCA_008630255.1_ASM863025v1

Download annotations/find similar RTs

Seq: VWRA01000128.1 Klebsiella pneumoniae strain P23 P23_L1.R1.clean_(paired)_contig_129, whole genome shotgun sequence (326 bp)
Overview 1 RT 1: 3-306 bp Neighborhood of RT #1 [3, 323] RVT-CRISPR-like Feature: gene Location: 3-323 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 57-306 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 57-306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VWRA01000015.1 Klebsiella pneumoniae strain P23 P23_L1.R1.clean_(paired)_contig_15, whole genome shotgun sequence (321216 bp)
Overview 1 RT 1: 48633-55802 bp Neighborhood of RT #1 [48633, 55819] EAL RVT-UG4 FimD FimC Feature: gene Location: 48633-48839 bp Feature: gene Location: 48962-49783 bp Feature: domain Description: EAL Location: 49646-49760 bp Feature: domain Description: EAL Location: 49646-49760 bp Feature: gene Location: 50420-52450 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50828-51272 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5082 8-512 72 bp Feature: gene Location: 52450-55059 bp Feature: domain Description: FimD Location: 52507-55048 bp Feature: domain Description: FimD Location: 52 507-55048 bp Feature: gene Location: 55091-55819 bp Feature: domain Description: FimC Location: 55139-55802 bp Feature: domain Description: FimC Location: 55139-55802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: VWRA01000080.1 Klebsiella pneumoniae strain P23 P23_L1.R1.clean_(paired)_contig_80, whole genome shotgun sequence (1497 bp)
Overview 1 RT 1: 3-1179 bp Neighborhood of RT #1 [3, 1496] RVT-UNC Feature: gene Location: 3-1496 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 654-1179 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 654-1179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)