myRT

myRT report for GCA_008630315.1_ASM863031v1

Download annotations/find similar RTs

Seq: VWRG01000014.1 Klebsiella pneumoniae strain P8 P8_L1.R1.clean_(paired)_contig_14, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1 1 54 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWRG01000006.1 Klebsiella pneumoniae strain P8 P8_L1.R1.clean_(paired)_contig_6, whole genome shotgun sequence (22344 bp)
Overview 1 RT 1: 1674-4944 bp Neighborhood of RT #1 [1674, 4958] RVT-GII PRK10276 Feature: gene Location: 1674-1889 bp Feature: gene Location: 2156-2386 bp Feature: gene Location: 2620-4131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3025-3739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 5-3739 bp Feature: gene Location: 4182-4415 bp Feature: gene Location: 4533-4958 bp Feature: domain Description: PRK10276 Location: 4536-4944 bp Feature: domain Description: PRK102 76 Location: 4536-4944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: VWRG01000076.1 Klebsiella pneumoniae strain P8 P8_L1.R1.clean_(paired)_contig_76, whole genome shotgun sequence (13709 bp)
Overview 1 RT 1: 2778-6381 bp Neighborhood of RT #1 [2778, 6506] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2778-3035 bp Feature: gene Location: 3066-3341 bp Feature: gene Location: 3915-5582 bp Feature: RT Description: RVT_N Location: 3963-4200 bp Feature: RT Description: RVT_N Location: 3 963 -4200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4251-4893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4251-4893 bp Feature: domain Description: GIIM Note: maturase Location: 4944-5178 bp Feature: domain Description: GIIM Note: maturase Location: 4944-5178 bp Feature: domain Description: HNHc Note: nucleases Location: 5388-5547 bp Feature: domain Description: HNHc Note: nucleases Location: 53 88-5547 bp Feature: gene Location: 5896-6087 bp Feature: gene Location: 6084-6506 bp Feature: domain Description: DUF1380 Location: 6087-6381 bp Feature: domain Description: DUF13 80 Location: 6087-63 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: VWRG01000083.1 Klebsiella pneumoniae strain P8 P8_L1.R1.clean_(paired)_contig_83, whole genome shotgun sequence (33652 bp)
Overview 1 RT 1: 9914-15721 bp Neighborhood of RT #1 [9914, 16251] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 9914-10219 bp Feature: gene Location: 11098-13374 bp Feature: domain Description: AAA_15 Location: 11131-12139 bp Feature: domain Description: AAA_15 Location: 11131-12139 bp Feature: gene Location: 13489-14589 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13672-14200 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13672-14 200 bp Feature: gene Location: 14842-15078 bp Feature: gene Location: 15148-16251 bp Feature: domain Description: STKc_PknB_like Location: 15280-15721 bp Feature: domain Description: STKc_PknB_like Location: 15280-15721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)