myRT

myRT report for GCA_008630355.1_ASM863035v1

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Seq: VWRI01000027.1 Klebsiella pneumoniae strain P3 P3_L3.R1.clean_(paired)_contig_27, whole genome shotgun sequence (33650 bp)
Overview 1 RT 1: 17401-23738 bp Neighborhood of RT #1 [17401, 23738] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17401-18504 bp Feature: domain Description: STKc_PknB_like Location: 17533-17974 bp Feature: domain Description: STKc_PknB_like Location: 1 7533-1 7974 bp Feature: gene Location: 18574-18810 bp Feature: gene Location: 19063-20163 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19246-19774 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9246-1 9774 bp Feature: gene Location: 20278-22524 bp Feature: domain Description: AAA_15 Location: 20281-21289 bp Feature: domain Description: AAA_1 5 Location: 20281 -21 289 bp Feature: gene Location: 23433-23738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: VWRI01000057.1 Klebsiella pneumoniae strain P3 P3_L3.R1.clean_(paired)_contig_57, whole genome shotgun sequence (1994 bp)
Overview 1 RT 1: 59-1719 bp Neighborhood of RT #1 [59, 1719] RVT-GII Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1552-1719 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWRI01000072.1 Klebsiella pneumoniae strain P3 P3_L3.R1.clean_(paired)_contig_72, whole genome shotgun sequence (13707 bp)
Overview 1 RT 1: 2777-6380 bp Neighborhood of RT #1 [2777, 6505] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2777-3034 bp Feature: gene Location: 3065-3340 bp Feature: gene Location: 3914-5581 bp Feature: RT Description: RVT_N Location: 3962-4199 bp Feature: RT Description: RVT_N Location: 3 962-4199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4250-4892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4250-4892 bp Feature: domain Description: GIIM Note: maturase Location: 4943-5177 bp Feature: domain Description: GIIM Note: maturase Location: 4943 -5177 bp Feature: domain Description: HNHc Note: nucleases Location: 5387-5546 bp Feature: domain Description: HNHc Note: nucleases Location: 53 87-5546 bp Feature: gene Location: 5895-6086 bp Feature: gene Location: 6083-6505 bp Feature: domain Description: DUF1380 Location: 6086-6380 bp Feature: domain Description: DUF13 80 Location: 6086-63 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)