myRT

myRT report for GCA_008630475.1_ASM863047v1

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Seq: VWRH01000027.1 Klebsiella pneumoniae strain P7 P7_L3.R1.clean_(paired)_contig_27, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1 442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWRH01000028.1 Klebsiella pneumoniae strain P7 P7_L3.R1.clean_(paired)_contig_28, whole genome shotgun sequence (25797 bp)
Overview 1 RT 1: 17467-20651 bp Neighborhood of RT #1 [17467, 20651] PRK10276 RVT-GII Feature: gene Location: 17467-17892 bp Feature: domain Description: PRK10276 Location: 17470-17878 bp Feature: domain Description: PRK102 76 Location: 17470-17878 bp Feature: gene Location: 18010-18243 bp Feature: gene Location: 18294-19805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18699-19413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18699-19413 bp Feature: gene Location: 20039-20269 bp Feature: gene Location: 20328-20651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: VWRH01000055.1 Klebsiella pneumoniae strain P7 P7_L3.R1.clean_(paired)_contig_55, whole genome shotgun sequence (13790 bp)
Overview 1 RT 1: 7204-10257 bp Neighborhood of RT #1 [7204, 10257] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7204-7626 bp Feature: domain Description: DUF1380 Location: 7207-7501 bp Feature: domain Description: DUF13 80 Location: 7207-7501 bp Feature: gene Location: 7623-7814 bp Feature: gene Location: 8128-9795 bp Feature: RT Description: RVT_N Location: 8176-8413 bp Feature: RT Description: RVT_N Location: 8176-8413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8464-9106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8464-9106 bp Feature: domain Description: GIIM Note: maturase Location: 9157-9391 bp Feature: domain Description: GIIM Note: maturase Location: 9157-93 91 bp Feature: domain Description: HNHc Note: nucleases Location: 9601-9760 bp Feature: domain Description: HNHc Note: nucleases Location: 9601-9760 bp Feature: gene Location: 9832-9978 bp Feature: gene Location: 10075-10257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: VWRH01000059.1 Klebsiella pneumoniae strain P7 P7_L3.R1.clean_(paired)_contig_59, whole genome shotgun sequence (33734 bp)
Overview 1 RT 1: 17402-23739 bp Neighborhood of RT #1 [17402, 23739] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17402-18505 bp Feature: domain Description: STKc_PknB_like Location: 17534-17975 bp Feature: domain Description: STKc_PknB_like Location: 17534 -17975 bp Feature: gene Location: 18575-18811 bp Feature: gene Location: 19064-20164 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19247-19775 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1924 7-19775 bp Feature: gene Location: 20279-22525 bp Feature: domain Description: AAA_15 Location: 20282-21290 bp Feature: domain Description: AAA_15 Location: 20282-21290 bp Feature: gene Location: 23434-23739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)