myRT

myRT report for GCA_008632285.1_ASM863228v1

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Seq: VWXT01000652.1 Pseudomonas veronii strain UKR4 NODE_1009_length_5773_cov_164.809982, whole genome shotgun sequence (5803 bp)
Overview 1 RT 1: 4111-5703 bp Neighborhood of RT #1 [4111, 5801] RVT-GII GIIM Feature: gene Location: 4111-4290 bp Feature: gene Location: 4474-4872 bp Feature: gene Location: 5022-5801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5052-5403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5052-5403 bp Feature: domain Description: GIIM Note: maturase Location: 5481-5703 bp Feature: domain Description: GIIM Note: maturase Location: 5481 -5703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VWXT01000697.1 Pseudomonas veronii strain UKR4 NODE_1128_length_2468_cov_175.316040, whole genome shotgun sequence (2498 bp)
Overview 1 RT 1: 3-2475 bp Neighborhood of RT #1 [3, 2495] RVT-GII InsE PHA02517 Feature: gene Location: 3-350 bp Feature: gene Location: 754-1287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-12 79 bp Feature: gene Location: 1339-1647 bp Feature: domain Description: InsE Location: 1342-1633 bp Feature: domain Description: InsE Location: 1342 -1633 bp Feature: gene Location: 1692-2495 bp Feature: domain Description: PHA02517 Location: 1698-2475 bp Feature: domain Description: PHA02 517 Location: 1698-2 475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: VWXT01000129.1 Pseudomonas veronii strain UKR4 NODE_148_length_2894_cov_153.345200, whole genome shotgun sequence (2924 bp)
Overview 1 RT 1: 1-1436 bp Neighborhood of RT #1 [1, 1436] RVT-GII Feature: gene Location: 1-141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-13 9 bp Feature: gene Location: 274-486 bp Feature: gene Location: 540-1436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWXT01000178.1 Pseudomonas veronii strain UKR4 NODE_202_length_16534_cov_142.255722, whole genome shotgun sequence (16564 bp)
Overview 1 RT 1: 2475-9678 bp Neighborhood of RT #1 [2475, 9698] Porin_O_P RVT-GII GIIM Hydantoinase_B HyuA Feature: gene Location: 2475-3653 bp Feature: domain Description: Porin_O_P Location: 2700-3537 bp Feature: domain Description: Porin_O_P Location: 2700-3537 bp Feature: gene Location: 3834-4343 bp Feature: gene Location: 4318-5526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4510-5125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 510-5125 bp Feature: domain Description: GIIM Note: maturase Location: 5179-5407 bp Feature: domain Description: GIIM Note: maturase Location: 5179-54 07 bp Feature: gene Location: 5827-7572 bp Feature: domain Description: Hydantoinase_B Location: 5842-7426 bp Feature: domain Description: Hydantoinase_B Location: 584 2-74 26 bp Feature: gene Location: 7608-9698 bp Feature: domain Description: HyuA Location: 7623-9678 bp Feature: domain Description: HyuA Location: 7623-9678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Porin_O_P (pfam07396), RVT-GII, GIIM (pfam08388), Hydantoinase_B (pfam02538), HyuA (COG0145)

Seq: VWXT01000858.1 Pseudomonas veronii strain UKR4 NODE_2092_length_1702_cov_167.358994, whole genome shotgun sequence (1732 bp)
Overview 1 RT 1: 3-1703 bp Neighborhood of RT #1 [3, 1729] DDE_3 RVT-GII rve_3 Feature: gene Location: 3-488 bp Feature: domain Description: DDE_3 Location: 54-444 bp Feature: domain Description: DDE_3 Location: 5 4-444 bp Feature: gene Location: 728-1087 bp Feature: gene Location: 1130-1729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1136-1379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1136-1379 bp Feature: domain Description: rve_3 Location: 1508-1703 bp Feature: domain Description: rve_3 Location: 15 08-1703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, rve_3 (pfam13683), DDE_3 (pfam13358)

Seq: VWXT01000864.1 Pseudomonas veronii strain UKR4 NODE_2204_length_1847_cov_141.831619, whole genome shotgun sequence (1877 bp)
Overview 1 RT 1: 1-1405 bp Neighborhood of RT #1 [1, 1791] RVT-GII Feature: gene Location: 1-1791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 715-1405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 715-1405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWXT01000215.1 Pseudomonas veronii strain UKR4 NODE_242_length_2328_cov_324.080322, whole genome shotgun sequence (2358 bp)
Overview 1 RT 1: 119-1373 bp Neighborhood of RT #1 [119, 1780] RVT_N RVT-GII GIIM Feature: gene Location: 119-1780 bp Feature: RT Description: RVT_N Location: 164-407 bp Feature: RT Description: RVT_N Location: 164-407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452-1088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452-1088 bp Feature: domain Description: GIIM Note: maturase Location: 1145-1373 bp Feature: domain Description: GIIM Note: maturase Location: 1145-137 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VWXT01000519.1 Pseudomonas veronii strain UKR4 NODE_733_length_3516_cov_159.310013, whole genome shotgun sequence (3546 bp)
Overview 1 RT 1: 2-2319 bp Neighborhood of RT #1 [2, 2319] RVT-DGRs HNH_3 Feature: gene Location: 2-1180 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 218-974 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 218 -974 bp Feature: gene Location: 1365-2096 bp Feature: domain Description: HNH_3 Location: 1857-1989 bp Feature: domain Description: HNH_3 Location: 18 57-198 9 bp Feature: gene Location: 2077-2319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH_3 (pfam13392), RVT-DGRs