myRT

myRT report for GCA_008632315.1_ASM863231v1

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Seq: VWXU01000770.1 Pseudomonas veronii strain UKR3 NODE_1180_length_3516_cov_187.774750, whole genome shotgun sequence (3546 bp)
Overview 1 RT 1: 2-2319 bp Neighborhood of RT #1 [2, 2319] RVT-DGRs HNH_3 Feature: gene Location: 2-1180 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 218-974 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21 8-974 bp Feature: gene Location: 1365-2096 bp Feature: domain Description: HNH_3 Location: 1857-1989 bp Feature: domain Description: HNH_3 Location: 1 857-1 989 bp Feature: gene Location: 2077-2319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH_3 (pfam13392), RVT-DGRs

Seq: VWXU01000772.1 Pseudomonas veronii strain UKR3 NODE_1182_length_1847_cov_291.776398, whole genome shotgun sequence (1877 bp)
Overview 1 RT 1: 1-1405 bp Neighborhood of RT #1 [1, 1791] RVT-GII Feature: gene Location: 1-1791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 715-1405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 715-1405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWXU01000789.1 Pseudomonas veronii strain UKR3 NODE_1223_length_1702_cov_223.994125, whole genome shotgun sequence (1732 bp)
Overview 1 RT 1: 1-1686 bp Neighborhood of RT #1 [1, 1730] RVT-GII rve_3 DDE_3 Feature: gene Location: 1-603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-253 bp Feature: domain Description: rve_3 Location: 382-577 bp Feature: domain Description: rve_3 Location: 3 82-577 bp Feature: gene Location: 646-1005 bp Feature: gene Location: 1245-1730 bp Feature: domain Description: DDE_3 Location: 1296-1686 bp Feature: domain Description: DDE_3 Location: 1296-1686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, rve_3 (pfam13683)

Seq: VWXU01000232.1 Pseudomonas veronii strain UKR3 NODE_261_length_2475_cov_225.423035, whole genome shotgun sequence (2505 bp)
Overview 1 RT 1: 5-2503 bp Neighborhood of RT #1 [5, 2503] PHA02517 InsE RVT-GII Feature: gene Location: 5-814 bp Feature: domain Description: PHA02517 Location: 11-788 bp Feature: domain Description: PHA02517 Location: 11-788 bp Feature: gene Location: 859-1167 bp Feature: domain Description: InsE Location: 862-1153 bp Feature: domain Description: InsE Location: 862-1153 bp Feature: gene Location: 1219-1752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1432-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 32-174 4 bp Feature: gene Location: 2156-2503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: VWXU01000311.1 Pseudomonas veronii strain UKR3 NODE_393_length_5773_cov_222.365494, whole genome shotgun sequence (5803 bp)
Overview 1 RT 1: 3-1693 bp Neighborhood of RT #1 [3, 1693] RVT-GII GIIM Feature: gene Location: 3-782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33-384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33-384 bp Feature: domain Description: GIIM Note: maturase Location: 462-684 bp Feature: domain Description: GIIM Note: maturase Location: 462-684 bp Feature: gene Location: 932-1330 bp Feature: gene Location: 1514-1693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VWXU01000414.1 Pseudomonas veronii strain UKR3 NODE_502_length_2328_cov_445.636169, whole genome shotgun sequence (2358 bp)
Overview 1 RT 1: 119-1373 bp Neighborhood of RT #1 [119, 1780] RVT_N RVT-GII GIIM Feature: gene Location: 119-1780 bp Feature: RT Description: RVT_N Location: 164-407 bp Feature: RT Description: RVT_N Location: 16 4-407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452-1088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452-1088 bp Feature: domain Description: GIIM Note: maturase Location: 1145-1373 bp Feature: domain Description: GIIM Note: maturase Location: 1145-1373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VWXU01000454.1 Pseudomonas veronii strain UKR3 NODE_548_length_2888_cov_221.799866, whole genome shotgun sequence (2918 bp)
Overview 1 RT 1: 1483-2916 bp Neighborhood of RT #1 [1483, 2915] RVT-GII Feature: gene Location: 1483-2379 bp Feature: gene Location: 2433-2645 bp Feature: gene Location: 2778-2915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2856-2916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2856-2916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VWXU01000482.1 Pseudomonas veronii strain UKR3 NODE_594_length_16543_cov_158.248383, whole genome shotgun sequence (16573 bp)
Overview 1 RT 1: 6867-13974 bp Neighborhood of RT #1 [6867, 14090] HyuA Hydantoinase_B RVT-GII GIIM Porin_O_P Feature: gene Location: 6867-8957 bp Feature: domain Description: HyuA Location: 6882-8937 bp Feature: domain Description: HyuA Location: 68 8 2-8 937 bp Feature: gene Location: 8993-10738 bp Feature: domain Description: Hydantoinase_B Location: 9008-10592 bp Feature: domain Description: Hydantoinase_B Location: 9008 -10592 bp Feature: gene Location: 11039-12247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11231-11846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11231-118 46 bp Feature: domain Description: GIIM Note: maturase Location: 11900-12128 bp Feature: domain Description: GIIM Note: maturase Location: 11900-12128 bp Feature: gene Location: 12252-12731 bp Feature: gene Location: 12912-14090 bp Feature: domain Description: Porin_O_P Location: 13137-13974 bp Feature: domain Description: Porin_O_P Location: 13137-13974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Porin_O_P (pfam07396), HyuA (COG0145), Hydantoinase_B (pfam02538)