myRT

myRT report for GCA_008634005.1_ASM863400v1

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Seq: VMRG01000001.1 Chlorobium phaeovibrioides strain GrTcv12, whole genome shotgun sequence (2055276 bp)
Overview 1 RT 1: 690211-695936 bp 2 RT 2: 1108139-1112203 bp Neighborhood of RT #1 [690211, 695944] PAP2_like_5 HTH_XRE RVT-GII GMP_PMI PRK15414 Neighborhood of RT #2 [1108139, 1112203] IstB_IS21 COG4584 COG4584 RVT-UG4 ocin_ocin_ocin_TIGR03798 Feature: gene Location: 690211-690801 bp Feature: domain Description: PAP2_like_5 Location: 690421-690724 bp Feature: domain Description: PAP2_like_5 Location: 690421 -690724 bp Feature: gene Location: 691156-691422 bp Feature: domain Description: HTH_XRE Location: 691192-691360 bp Feature: domain Description: HTH_XRE Location: 691 1 92-691 360 bp Feature: gene Location: 691571-692470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691601-692252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691 601 -692252 bp Feature: gene Location: 693157-694590 bp Feature: domain Description: GMP_PMI Location: 693166-694585 bp Feature: domain Description: GMP_PMI Location: 6931 66-694585 bp Feature: gene Location: 694577-695944 bp Feature: domain Description: PRK15414 Location: 694601-695936 bp Feature: domain Description: PRK1 541 4 Location: 694601 -695936 bp Feature: gene Location: 1108139-1108876 bp Feature: domain Description: IstB_IS21 Location: 1108298-1108823 bp Feature: domain Description: IstB_IS21 Location: 1 1 08298-1 1 08823 bp Feature: gene Location: 1108869-1110419 bp Feature: domain Description: COG4584 Location: 1108989-1109778 bp Feature: domain Description: COG4584 Location: 1 1 08989-1 1 09778 bp Feature: domain Description: COG4584 Location: 1109865-1110258 bp Feature: domain Description: COG4584 Location: 1 1 09865-1 1 1 0258 bp Feature: gene Location: 1110480-1111454 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1110771-1111215 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 1 0771 -1 1 1 1 21 5 bp Feature: gene Location: 1111551-1111784 bp Feature: domain Description: ocin_ocin_ocin_TIGR03798 Location: 1111560-1111716 bp Feature: domain Description: ocin_ocin_ocin_TIGR03798 Location: 1 1 1 1 560-1 1 1 1 71 6 bp Feature: gene Location: 1111895-1112203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_like_5 (cd03394), HTH_XRE (smart00530), RVT-GII, GMP_PMI (TIGR01479), PRK15414 (phosphomannomutase), IstB_IS21 (pfam01695), COG4584 (Transposase ), RVT-UG4, ocin_ocin_ocin_TIGR03798