myRT

myRT report for GCA_008634565.1_ASM863456v1

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Seq: SIZS01000032.1 Klebsiella pneumoniae strain SHK103 Scaffold32, whole genome shotgun sequence (41124 bp)
Overview 1 RT 1: 33006-38932 bp Neighborhood of RT #1 [33006, 38949] Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 33006-33446 bp Feature: domain Description: Integrase_1 Location: 33012-33228 bp Feature: domain Description: Integrase_1 Location: 3301 2-33228 bp Feature: gene Location: 33503-34342 bp Feature: gene Location: 34339-35580 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34747-35191 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34747-351 91 bp Feature: gene Location: 35580-38189 bp Feature: domain Description: FimD Location: 35637-38178 bp Feature: domain Description: FimD Location: 35637-381 78 bp Feature: gene Location: 38221-38949 bp Feature: domain Description: FimC Location: 38269-38932 bp Feature: domain Description: FimC Location: 38269-38932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: SIZS01000048.1 Klebsiella pneumoniae strain SHK103 Scaffold48, whole genome shotgun sequence (9334 bp)
Overview 1 RT 1: 1-4549 bp Neighborhood of RT #1 [1, 4549] PRK15417 Arr-ms RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 1-897 bp Feature: domain Description: PRK15417 Location: 4-898 bp Feature: domain Description: PRK15417 Location: 4-898 bp Feature: gene Location: 1070-1522 bp Feature: domain Description: Arr-ms Location: 1130-1436 bp Feature: domain Description: Arr-ms Location: 1130-1436 bp Feature: gene Location: 1603-2856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1795-2419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1795-2 419 bp Feature: domain Description: GIIM Note: maturase Location: 2458-2677 bp Feature: domain Description: GIIM Note: maturase Location: 2 458-2 677 bp Feature: gene Location: 3577-4131 bp Feature: domain Description: N6_acetyl_AAC6 Location: 3580-4129 bp Feature: domain Description: N6_acetyl_AAC6 Location: 3580-412 9 bp Feature: gene Location: 4124-4549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), Arr-ms (pfam12120), RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431)