myRT

myRT report for GCA_008634675.1_ASM863467v1

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Seq: SIZP01000030.1 Klebsiella pneumoniae strain SHK059 Scaffold30, whole genome shotgun sequence (41443 bp)
Overview 1 RT 1: 2388-8113 bp Neighborhood of RT #1 [2388, 8331] FimC FimD RVT-UG4 Integrase_1 Feature: gene Location: 2388-3116 bp Feature: domain Description: FimC Location: 2436-3099 bp Feature: domain Description: FimC Location: 2436-3099 bp Feature: gene Location: 3148-5757 bp Feature: domain Description: FimD Location: 3205-5746 bp Feature: domain Description: FimD Location: 3205-5746 bp Feature: gene Location: 5757-6998 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6165-6609 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 61 65-6609 bp Feature: gene Location: 6995-7834 bp Feature: gene Location: 7891-8331 bp Feature: domain Description: Integrase_1 Location: 7897-8113 bp Feature: domain Description: Integrase_1 Location: 7897-81 1 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835)

Seq: SIZP01000044.1 Klebsiella pneumoniae strain SHK059 Scaffold44, whole genome shotgun sequence (9334 bp)
Overview 1 RT 1: 4883-9332 bp Neighborhood of RT #1 [4883, 9331] N6_acetyl_AAC6 RVT-GII GIIM Arr-ms PRK15417 Feature: gene Location: 4883-5116 bp Feature: gene Location: 5204-5758 bp Feature: domain Description: N6_acetyl_AAC6 Location: 5207-5756 bp Feature: domain Description: N6_acetyl_AAC6 Location: 52 07-5756 bp Feature: gene Location: 6479-7732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6671-7295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6671-72 95 bp Feature: domain Description: GIIM Note: maturase Location: 7334-7553 bp Feature: domain Description: GIIM Note: maturase Location: 7334-7553 bp Feature: gene Location: 7813-8265 bp Feature: domain Description: Arr-ms Location: 7873-8179 bp Feature: domain Description: Arr-ms Location: 7873-8179 bp Feature: gene Location: 8438-9331 bp Feature: domain Description: PRK15417 Location: 8441-9332 bp Feature: domain Description: PRK15417 Location: 8441-9332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_acetyl_AAC6 (TIGR04431), RVT-GII, GIIM (pfam08388), Arr-ms (pfam12120), PRK15417 (integron integrase)