myRT

myRT report for GCA_008634845.1_CUV_Ostr_1.0

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Seq: SNRX01000001.1 Bacteroidales bacterium St1 scaffold1-417286, whole genome shotgun sequence (417286 bp)
Overview 1 RT 1: 55811-61116 bp Neighborhood of RT #1 [55811, 61175] YfmG Hrd RVT-DGRs AAA_14 Feature: gene Location: 55811-57037 bp Feature: domain Description: YfmG Location: 56225-57029 bp Feature: domain Description: YfmG Location: 56225-57029 bp Feature: gene Location: 57108-57653 bp Feature: domain Description: Hrd Location: 57429-57606 bp Feature: domain Description: Hrd Location: 57429-57606 bp Feature: gene Location: 57964-58965 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58171-58825 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 581 71 -58825 bp Feature: gene Location: 59289-60764 bp Feature: gene Location: 60954-61175 bp Feature: domain Description: AAA_14 Location: 61008-61116 bp Feature: domain Description: AAA_1 4 Location: 61 008-61 1 1 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Hrd (LOAD_Hrd), RVT-DGRs, AAA_14 (pfam13173)

Seq: SNRX01000002.1 Bacteroidales bacterium St1 scaffold2-309449, whole genome shotgun sequence (309449 bp)
Overview 1 RT 1: 86229-88908 bp 2 RT 2: 220935-224692 bp Neighborhood of RT #1 [86229, 88908] RVT-GII GIIM Neighborhood of RT #2 [220935, 224697] RVT-GII GIIM COG2865 Feature: gene Location: 86229-86405 bp Feature: gene Location: 86424-86579 bp Feature: gene Location: 86622-88022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86955-87570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86955-87570 bp Feature: domain Description: GIIM Note: maturase Location: 87627-87831 bp Feature: domain Description: GIIM Note: maturase Location: 8762 7-87831 bp Feature: gene Location: 88351-88530 bp Feature: gene Location: 88666-88908 bp Feature: gene Location: 220935-221099 bp Feature: gene Location: 221136-221357 bp Feature: gene Location: 221428-222828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221761-222376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 1761-2 2 2 376 bp Feature: domain Description: GIIM Note: maturase Location: 222433-222637 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 2 433-2 2 2 637 bp Feature: gene Location: 222871-223026 bp Feature: gene Location: 223384-224697 bp Feature: domain Description: COG2865 Location: 223393-224692 bp Feature: domain Description: COG2 865 Location: 2 2 3393-2 2 4692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: SNRX01000203.1 Bacteroidales bacterium St1 scaffold203-2989, whole genome shotgun sequence (2989 bp)
Overview 1 RT 1: 3-2638 bp Neighborhood of RT #1 [3, 2988] RVT-DGRs Feature: gene Location: 3-1280 bp Feature: gene Location: 1504-1647 bp Feature: gene Location: 1765-2988 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1972-2638 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1972-263 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs