myRT

myRT report for GCA_008635795.1_ASM863579v1

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Seq: VWRQ01000011.1 Paenibacillus sp. SYSU G01001 SYSU_G01001_Contig11, whole genome shotgun sequence (207204 bp)
Overview 1 RT 1: 1-2686 bp Neighborhood of RT #1 [1, 2709] RVT-GII GIIM BaeS OmpR Feature: gene Location: 1-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-553 bp Feature: domain Description: GIIM Note: maturase Location: 679-856 bp Feature: domain Description: GIIM Note: maturase Location: 679-856 bp Feature: gene Location: 1025-2011 bp Feature: domain Description: BaeS Location: 1202-1991 bp Feature: domain Description: BaeS Location: 1 202-1 991 bp Feature: gene Location: 2008-2709 bp Feature: domain Description: OmpR Location: 2017-2686 bp Feature: domain Description: OmpR Location: 201 7-2686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), BaeS (COG0642), OmpR (COG0745)

Seq: VWRQ01000002.1 Paenibacillus sp. SYSU G01001 SYSU_G01001_Contig2, whole genome shotgun sequence (474682 bp)
Overview 1 RT 1: 161558-170237 bp 2 RT 2: 457242-463706 bp Neighborhood of RT #1 [161558, 170809] NorV RVT-UG1 PHP_HisPPase Neighborhood of RT #2 [457242, 463765] OCDMu PRK13656 RVT-GII GIIM IlvB PaaK Feature: gene Location: 161558-162805 bp Feature: domain Description: NorV Location: 161585-162677 bp Feature: domain Description: NorV Location: 161585-162 677 bp Feature: gene Location: 163166-164059 bp Feature: gene Location: 164467-168309 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 165109-165655 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 165109-165655 bp Feature: gene Location: 168685-168999 bp Feature: gene Location: 169229-170809 bp Feature: domain Description: PHP_HisPPase Location: 169760-170237 bp Feature: domain Description: PHP_HisPPase Location: 169760-1702 37 bp Feature: gene Location: 457242-458216 bp Feature: domain Description: OCDMu Location: 457245-458208 bp Feature: domain Description: OCDMu Location: 4572 45-4582 08 bp Feature: gene Location: 458393-459586 bp Feature: domain Description: PRK13656 Location: 458399-459578 bp Feature: domain Description: PRK13656 Location: 458399-459578 bp Feature: gene Location: 459666-460202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459669-459771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459669-459771 bp Feature: domain Description: GIIM Note: maturase Location: 459822-460035 bp Feature: domain Description: GIIM Note: maturase Location: 45982 2 -460035 bp Feature: gene Location: 460657-462366 bp Feature: domain Description: IlvB Location: 460672-462331 bp Feature: domain Description: IlvB Location: 460672 -462 331 bp Feature: gene Location: 462368-463765 bp Feature: domain Description: PaaK Location: 462407-463706 bp Feature: domain Description: PaaK Location: 462 407-463706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NorV (COG0426), RVT-UG1, PHP_HisPPase (cd07432), OCDMu (COG2423), PRK13656 (enoyl- reductase FabV), RVT-GII, GIIM (pfam08388), IlvB (COG0028), PaaK (COG1541)

Seq: VWRQ01000027.1 Paenibacillus sp. SYSU G01001 SYSU_G01001_Contig27, whole genome shotgun sequence (79906 bp)
Overview 1 RT 1: 1-4714 bp Neighborhood of RT #1 [1, 4719] RVT-GII GIIM Glyco_hydro_88 Hepar_II_III_N Hepar_II_III Feature: gene Location: 1-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-553 bp Feature: domain Description: GIIM Note: maturase Location: 682-856 bp Feature: domain Description: GIIM Note: maturase Location: 682-856 bp Feature: gene Location: 1746-2876 bp Feature: domain Description: Glyco_hydro_88 Location: 1803-2838 bp Feature: domain Description: Glyco_hydro_88 Location: 1803 -283 8 bp Feature: gene Location: 2863-4719 bp Feature: domain Description: Hepar_II_III_N Location: 3118-4099 bp Feature: domain Description: Hepar_II_III_N Location: 3 118-4099 bp Feature: domain Description: Hepar_II_III Location: 4252-4714 bp Feature: domain Description: Hepar_II_III Location: 4252-4714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Glyco_hydro_88 (pfam07470), Hepar_II_III_N (pfam16889), Hepar_II_III (pfam07940)

Seq: VWRQ01000003.1 Paenibacillus sp. SYSU G01001 SYSU_G01001_Contig3, whole genome shotgun sequence (421583 bp)
Overview 1 RT 1: 34263-39958 bp Neighborhood of RT #1 [34263, 39966] DUF4015 PRK01766 RVT-GII GIIM Bacterial_PFK Feature: gene Location: 34263-35504 bp Feature: domain Description: DUF4015 Location: 34530-35478 bp Feature: domain Description: DUF4 015 Location: 34 530-354 78 bp Feature: gene Location: 35631-36995 bp Feature: domain Description: PRK01766 Location: 35640-36978 bp Feature: domain Description: PRK01766 Location: 3564 0-36978 bp Feature: gene Location: 37103-38500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37415-38042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374 15-3804 2 bp Feature: domain Description: GIIM Note: maturase Location: 38099-38309 bp Feature: domain Description: GIIM Note: maturase Location: 38099-38309 bp Feature: gene Location: 38583-38789 bp Feature: gene Location: 38995-39966 bp Feature: domain Description: Bacterial_PFK Location: 39010-39958 bp Feature: domain Description: Bacterial_PFK Location: 39010-39958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4015 (pfam13200), PRK01766 (multidrug efflux protein; Reviewed), RVT-GII, GIIM (pfam08388), Bacterial_PFK (cd00763)

Seq: VWRQ01000083.1 Paenibacillus sp. SYSU G01001 SYSU_G01001_Contig83, whole genome shotgun sequence (558 bp)
Overview 1 RT 1: 3-477 bp Neighborhood of RT #1 [3, 476] RVT-GII Feature: gene Location: 3-476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII