myRT

myRT report for GCA_008638305.1_ASM863830v1

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Seq: VTPZ01000001.1 Pseudomonas profundi strain M5 Scaffold1, whole genome shotgun sequence (662940 bp)
Overview 1 RT 1: 516315-523885 bp Neighborhood of RT #1 [516315, 523905] PRK10508 CypX RVT_N RVT-GII YkfC HNHc KOG4058 KOG1287 Feature: gene Location: 516315-517313 bp Feature: domain Description: PRK10508 Location: 516330-517299 bp Feature: domain Description: PRK1 0508 Location: 51 6330-51 7299 bp Feature: gene Location: 517385-518635 bp Feature: domain Description: CypX Location: 517394-518612 bp Feature: domain Description: CypX Location: 51 7394-51 861 2 bp Feature: gene Location: 519609-521252 bp Feature: domain Description: RVT_N Location: 519657-519900 bp Feature: domain Description: RVT_N Location: 51 9657-51 9900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519945-520566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 9945-520566 bp Feature: domain Description: YkfC Location: 520704-520872 bp Feature: domain Description: YkfC Location: 520704-520872 bp Feature: domain Description: HNHc Note: nucleases Location: 521046-521202 bp Feature: domain Description: HNHc Note: nucleases Location: 521 046-521 202 bp Feature: gene Location: 521733-522548 bp Feature: domain Description: KOG4058 Location: 521793-522246 bp Feature: domain Description: KOG4058 Location: 521 793-522246 bp Feature: gene Location: 522532-523905 bp Feature: domain Description: KOG1287 Location: 522586-523885 bp Feature: domain Description: KOG1 287 Location: 522586-523885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10508 (luciferase-like monooxygenase), CypX (COG2124), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), KOG4058 (KOG4058, Uncharacterized conserved protein ), KOG1287 (KOG1287, Amino acid transporters )

Seq: VTPZ01000006.1 Pseudomonas profundi strain M5 Scaffold6, whole genome shotgun sequence (278124 bp)
Overview 1 RT 1: 5931-10304 bp Neighborhood of RT #1 [5931, 10304] HATPase_c_3 DUF4263 RVT-UG2 Feature: gene Location: 5931-7682 bp Feature: domain Description: HATPase_c_3 Location: 5997-6408 bp Feature: domain Description: HATPase_c_3 Location: 5997-6408 bp Feature: domain Description: DUF4263 Location: 7254-7518 bp Feature: domain Description: DUF42 63 Location: 72 54-7518 bp Feature: gene Location: 7922-8296 bp Feature: gene Location: 8189-9472 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 8381-9167 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 8381-9167 bp Feature: gene Location: 9609-9818 bp Feature: gene Location: 10086-10304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HATPase_c_3 (pfam13589), DUF4263 (pfam14082), RVT-UG2