myRT

myRT report for GCA_008638345.1_ASM863834v1

Download annotations/find similar RTs

Seq: VTVA01000012.1 Pseudomonas sp. 16W4-4-3 Scaffold12, whole genome shotgun sequence (136352 bp)
Overview 1 RT 1: 129138-132811 bp Neighborhood of RT #1 [129138, 132993] Tra5 RVT-GII GIIM HTH_32 Feature: gene Location: 129138-129491 bp Feature: gene Location: 129668-130264 bp Feature: domain Description: Tra5 Location: 129677-130112 bp Feature: domain Description: Tra5 Location: 1 29677-1 301 1 2 bp Feature: gene Location: 130366-131889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130639-131371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 30639-1 31 371 bp Feature: domain Description: GIIM Note: maturase Location: 131449-131671 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 449-1 31 671 bp Feature: gene Location: 131765-132259 bp Feature: gene Location: 132481-132993 bp Feature: domain Description: HTH_32 Location: 132589-132811 bp Feature: domain Description: HTH_32 Location: 1 32589-1 3281 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565)

Seq: VTVA01000045.1 Pseudomonas sp. 16W4-4-3 Scaffold45, whole genome shotgun sequence (1877 bp)
Overview 1 RT 1: 72-1810 bp Neighborhood of RT #1 [72, 1810] RVT-GII GIIM Feature: gene Location: 72-1427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-981 bp Feature: domain Description: GIIM Note: maturase Location: 1032-1245 bp Feature: domain Description: GIIM Note: maturase Location: 1032 -12 45 bp Feature: gene Location: 1532-1810 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)