myRT

myRT report for GCA_008640505.1_ASM864050v1

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Seq: VKDP01000026.1 Enterobacter hormaechei strain A11 NODE_26_length_28903_cov_32.1433_ID_2869, whole genome shotgun sequence (28903 bp)
Overview 1 RT 1: 5471-9671 bp Neighborhood of RT #1 [5471, 9679] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 5471-5629 bp Feature: domain Description: DDE_Tnp_IS1 Location: 5477-5615 bp Feature: domain Description: DDE_Tnp_IS1 Location: 5477-561 5 bp Feature: gene Location: 5656-5931 bp Feature: domain Description: InsA Location: 5659-5926 bp Feature: domain Description: InsA Location: 5659-5926 bp Feature: gene Location: 6084-7571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6489-7179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6489-71 79 bp Feature: gene Location: 7596-8408 bp Feature: domain Description: PRK10276 Location: 8028-8391 bp Feature: domain Description: PRK1 0276 Location: 8028-8391 bp Feature: gene Location: 8408-9679 bp Feature: domain Description: umuC Location: 8411-9671 bp Feature: domain Description: umuC Location: 841 1 -9671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: VKDP01000004.1 Enterobacter hormaechei strain A11 NODE_4_length_293841_cov_24.4421_ID_1104, whole genome shotgun sequence (293841 bp)
Overview 1 RT 1: 141160-143302 bp Neighborhood of RT #1 [141160, 144324] COG3943 SymE_toxin RVT-UG8 Feature: gene Location: 141160-141318 bp Feature: domain Description: COG3943 Location: 141163-141316 bp Feature: domain Description: COG3943 Location: 141163-141316 bp Feature: gene Location: 141421-141762 bp Feature: domain Description: SymE_toxin Location: 141478-141613 bp Feature: domain Description: SymE_toxin Location: 141478-141613 bp Feature: gene Location: 142357-144324 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 142864-143302 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 142 864-143302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3943 (Uncharacterized conserved protein ), SymE_toxin (pfam08845), RVT-UG8

Seq: VKDP01000006.1 Enterobacter hormaechei strain A11 NODE_6_length_276541_cov_21.4901_ID_1304, whole genome shotgun sequence (276541 bp)
Overview 1 RT 1: 133168-137195 bp Neighborhood of RT #1 [133168, 137195] MobA_MobL RVT-Retrons HTH_XRE Feature: gene Location: 133168-134568 bp Feature: domain Description: MobA_MobL Location: 133219-133756 bp Feature: domain Description: MobA_MobL Location: 13 3 219-13 3 756 bp Feature: gene Location: 134642-134791 bp Feature: gene Location: 135515-136615 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 135656-136211 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 5656-13 6211 bp Feature: gene Location: 136608-136889 bp Feature: domain Description: HTH_XRE Location: 136623-136788 bp Feature: domain Description: HTH_XRE Location: 13 6623 -13 6788 bp Feature: gene Location: 136980-137195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobA_MobL (pfam03389), RVT-Retrons, HTH_XRE (smart00530)