myRT

myRT report for GCA_008640695.1_ASM864069v1

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Seq: VKDW01000027.1 Enterobacter hormaechei strain A04 NODE_27_length_28903_cov_24.4383_ID_2943, whole genome shotgun sequence (28903 bp)
Overview 1 RT 1: 5471-9671 bp Neighborhood of RT #1 [5471, 9679] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 5471-5629 bp Feature: domain Description: DDE_Tnp_IS1 Location: 5477-5615 bp Feature: domain Description: DDE_Tnp_IS1 Location: 5477-561 5 bp Feature: gene Location: 5656-5931 bp Feature: domain Description: InsA Location: 5659-5926 bp Feature: domain Description: InsA Location: 5659-5926 bp Feature: gene Location: 6084-7571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6489-7179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6489-71 79 bp Feature: gene Location: 7596-8408 bp Feature: domain Description: PRK10276 Location: 8028-8391 bp Feature: domain Description: PRK1 0276 Location: 8028-8391 bp Feature: gene Location: 8408-9679 bp Feature: domain Description: umuC Location: 8411-9671 bp Feature: domain Description: umuC Location: 841 1 -9671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: VKDW01000004.1 Enterobacter hormaechei strain A04 NODE_4_length_293841_cov_17.4097_ID_1078, whole genome shotgun sequence (293841 bp)
Overview 1 RT 1: 149518-152680 bp Neighborhood of RT #1 [149518, 152682] RVT-UG8 SymE_toxin COG3943 Feature: gene Location: 149518-151485 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 150025-150463 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 15002 5-150463 bp Feature: gene Location: 152080-152421 bp Feature: domain Description: SymE_toxin Location: 152137-152272 bp Feature: domain Description: SymE_toxin Location: 152 137-152 2 72 bp Feature: gene Location: 152524-152682 bp Feature: domain Description: COG3943 Location: 152527-152680 bp Feature: domain Description: COG3943 Location: 152 52 7-152 680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, SymE_toxin (pfam08845), COG3943 (Uncharacterized conserved protein )

Seq: VKDW01000005.1 Enterobacter hormaechei strain A04 NODE_5_length_276541_cov_15.6675_ID_1271, whole genome shotgun sequence (276541 bp)
Overview 1 RT 1: 133168-137195 bp Neighborhood of RT #1 [133168, 137195] MobA_MobL RVT-Retrons HTH_XRE Feature: gene Location: 133168-134568 bp Feature: domain Description: MobA_MobL Location: 133219-133756 bp Feature: domain Description: MobA_MobL Location: 13 3 219-13 3 756 bp Feature: gene Location: 134642-134791 bp Feature: gene Location: 135515-136615 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 135656-136211 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 5656-13 6211 bp Feature: gene Location: 136608-136889 bp Feature: domain Description: HTH_XRE Location: 136623-136788 bp Feature: domain Description: HTH_XRE Location: 13 6623 -13 6788 bp Feature: gene Location: 136980-137195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobA_MobL (pfam03389), RVT-Retrons, HTH_XRE (smart00530)