myRT

myRT report for GCA_008641815.1_ASM864181v1

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Seq: VKFK01000017.1 Enterobacter ludwigii strain 048 NODE_17_length_112881_cov_142.624_ID_1507, whole genome shotgun sequence (112881 bp)
Overview 1 RT 1: 106982-111621 bp Neighborhood of RT #1 [106982, 111734] DAPG_hydrolase AcrR RVT-Retrons Ogr_Delta Feature: gene Location: 106982-107686 bp Feature: domain Description: DAPG_hydrolase Location: 107027-107645 bp Feature: domain Description: DAPG_hydrolase Location: 1 07027-1 07645 bp Feature: gene Location: 107783-108424 bp Feature: domain Description: AcrR Location: 107795-108332 bp Feature: domain Description: AcrR Location: 1 07795-1 08332 bp Feature: gene Location: 108851-109783 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108953-109547 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 08953-1 09547 bp Feature: gene Location: 109785-110660 bp Feature: gene Location: 111462-111734 bp Feature: domain Description: Ogr_Delta Location: 111486-111621 bp Feature: domain Description: Ogr_Delta Location: 1 1 1 486-1 1 1 621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DAPG_hydrolase (pfam18089), AcrR (COG1309), RVT-Retrons, Ogr_Delta (pfam04606)

Seq: VKFK01000044.1 Enterobacter ludwigii strain 048 NODE_44_length_8698_cov_178.756_ID_4196, whole genome shotgun sequence (8698 bp)
Overview 1 RT 1: 1248-5667 bp Neighborhood of RT #1 [1248, 5675] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 1248-1589 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1320-1587 bp Feature: domain Description: DDE_Tnp_IS1 Location: 132 0-1587 bp Feature: gene Location: 1653-1928 bp Feature: domain Description: InsA Location: 1656-1920 bp Feature: domain Description: InsA Location: 1656-192 0 bp Feature: gene Location: 2080-3567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2485-3175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 485-3175 bp Feature: gene Location: 3592-4404 bp Feature: domain Description: PRK10276 Location: 4024-4387 bp Feature: domain Description: PRK102 76 Location: 402 4-4387 bp Feature: gene Location: 4404-5675 bp Feature: domain Description: umuC Location: 4407-5667 bp Feature: domain Description: umuC Location: 4407-5667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)