myRT

myRT report for GCA_008641825.1_ASM864182v1

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Seq: VKFJ01000018.1 Enterobacter ludwigii strain 049 NODE_18_length_112881_cov_147.324_ID_1356, whole genome shotgun sequence (112881 bp)
Overview 1 RT 1: 106982-111621 bp Neighborhood of RT #1 [106982, 111734] DAPG_hydrolase AcrR RVT-Retrons Ogr_Delta Feature: gene Location: 106982-107686 bp Feature: domain Description: DAPG_hydrolase Location: 107027-107645 bp Feature: domain Description: DAPG_hydrolase Location: 1 07027-1 07645 bp Feature: gene Location: 107783-108424 bp Feature: domain Description: AcrR Location: 107795-108332 bp Feature: domain Description: AcrR Location: 1 07795-1 08332 bp Feature: gene Location: 108851-109783 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108953-109547 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 08953-1 09547 bp Feature: gene Location: 109785-110660 bp Feature: gene Location: 111462-111734 bp Feature: domain Description: Ogr_Delta Location: 111486-111621 bp Feature: domain Description: Ogr_Delta Location: 1 1 1 486-1 1 1 621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DAPG_hydrolase (pfam18089), AcrR (COG1309), RVT-Retrons, Ogr_Delta (pfam04606)

Seq: VKFJ01000047.1 Enterobacter ludwigii strain 049 NODE_47_length_7270_cov_302.017_ID_4097, whole genome shotgun sequence (7270 bp)
Overview 1 RT 1: 3-4239 bp Neighborhood of RT #1 [3, 4247] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 3-161 bp Feature: domain Description: DDE_Tnp_IS1 Location: 75-162 bp Feature: domain Description: DDE_Tnp_IS1 Location: 75-162 bp Feature: gene Location: 225-500 bp Feature: domain Description: InsA Location: 228-492 bp Feature: domain Description: InsA Location: 2 2 8-492 bp Feature: gene Location: 652-2139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1747 bp Feature: gene Location: 2164-2976 bp Feature: domain Description: PRK10276 Location: 2596-2959 bp Feature: domain Description: PRK102 76 Location: 2 596-2 959 bp Feature: gene Location: 2976-4247 bp Feature: domain Description: umuC Location: 2979-4239 bp Feature: domain Description: umuC Location: 2 979-42 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DDE_Tnp_IS1 (pfam03400), RVT-GII