myRT

myRT report for GCA_008662225.1_ASM866222v1

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Seq: RPZG01000165.1 Blautia wexlerae isolate S07B.meta.bin_10 k141_14891, whole genome shotgun sequence (14339 bp)
Overview 1 RT 1: 1-5175 bp Neighborhood of RT #1 [1, 5258] VirD4 Maff2 RVT-GII HNHc PrgI Feature: gene Location: 1-855 bp Feature: domain Description: VirD4 Location: 10-736 bp Feature: domain Description: VirD4 Location: 1 0-736 bp Feature: gene Location: 1003-1134 bp Feature: domain Description: Maff2 Location: 1006-1132 bp Feature: domain Description: Maff2 Location: 1 006-1 1 32 bp Feature: gene Location: 1837-3723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2170-2908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 70-2908 bp Feature: domain Description: HNHc Note: nucleases Location: 3445-3607 bp Feature: domain Description: HNHc Note: nucleases Location: 3445-3607 bp Feature: gene Location: 3996-4865 bp Feature: gene Location: 4890-5258 bp Feature: domain Description: PrgI Location: 4908-5175 bp Feature: domain Description: PrgI Location: 4908-51 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), Maff2 (pfam12750), RVT-GII, HNHc (smart00507), PrgI (pfam12666)

Seq: RPZG01000035.1 Blautia wexlerae isolate S07B.meta.bin_10 k141_23172, whole genome shotgun sequence (5803 bp)
Overview 1 RT 1: 3-4386 bp Neighborhood of RT #1 [3, 4400] CdsB RVT-GII GIIM YfdV Feature: gene Location: 3-1064 bp Feature: domain Description: CdsB Location: 21-1065 bp Feature: domain Description: CdsB Location: 2 1-1065 bp Feature: gene Location: 1246-2568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1513-2206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1513-2 2 06 bp Feature: domain Description: GIIM Note: maturase Location: 2293-2482 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 93-2 482 bp Feature: gene Location: 3161-3490 bp Feature: gene Location: 3468-4400 bp Feature: domain Description: YfdV Location: 3489-4386 bp Feature: domain Description: YfdV Location: 3489-4386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CdsB (COG3681), RVT-GII, GIIM (pfam08388), YfdV (COG0679)

Seq: RPZG01000228.1 Blautia wexlerae isolate S07B.meta.bin_10 k141_35158, whole genome shotgun sequence (19594 bp)
Overview 1 RT 1: 14082-19591 bp Neighborhood of RT #1 [14082, 19591] DDE_Tnp_1 COG3547 RVT-GII GIIM Feature: gene Location: 14082-15362 bp Feature: domain Description: DDE_Tnp_1 Location: 14427-15084 bp Feature: domain Description: DDE_Tnp_1 Location: 14427-15084 bp Feature: gene Location: 15484-16776 bp Feature: domain Description: COG3547 Location: 15544-16579 bp Feature: domain Description: COG3 547 Location: 15544-16579 bp Feature: gene Location: 17394-18788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17748-18435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17748-1843 5 bp Feature: domain Description: GIIM Note: maturase Location: 18501-18720 bp Feature: domain Description: GIIM Note: maturase Location: 18501-18720 bp Feature: gene Location: 19133-19591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: RPZG01000264.1 Blautia wexlerae isolate S07B.meta.bin_10 k141_41382, whole genome shotgun sequence (6358 bp)
Overview 1 RT 1: 1-6355 bp Neighborhood of RT #1 [1, 6355] Peptidase_M78 YodL DUF3849 KOG1000 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-2172 bp Feature: domain Description: Peptidase_M78 Location: 523-739 bp Feature: domain Description: Peptidase_M78 Location: 523-739 bp Feature: domain Description: YodL Location: 1501-1795 bp Feature: domain Description: YodL Location: 1501-1795 bp Feature: domain Description: DUF3849 Location: 1852-2173 bp Feature: domain Description: DUF384 9 Location: 1852-2173 bp Feature: gene Location: 2217-3293 bp Feature: domain Description: KOG1000 Location: 2244-2493 bp Feature: domain Description: KOG1000 Location: 224 4 -24 93 bp Feature: gene Location: 3374-5188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3638-4460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3638-4 4 60 bp Feature: domain Description: Intron_maturas2 Location: 4532-4964 bp Feature: domain Description: Intron_maturas2 Location: 4 532-4 964 bp Feature: domain Description: HNHc Note: nucleases Location: 5015-5159 bp Feature: domain Description: HNHc Note: nucleases Location: 5015-5159 bp Feature: gene Location: 5421-5615 bp Feature: gene Location: 5738-6355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M78 (pfam06114), YodL (pfam14191), DUF3849 (pfam12960), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RPZG01000129.1 Blautia wexlerae isolate S07B.meta.bin_10 k141_5522, whole genome shotgun sequence (12318 bp)
Overview 1 RT 1: 102-3870 bp Neighborhood of RT #1 [102, 3872] RVT-GII RVT-GII SpoIIIAH spore_III_AG spore_III_AG Feature: gene Location: 102-1250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189-405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189-405 bp Feature: gene Location: 1286-2011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1595-1982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 95 -1982 bp Feature: gene Location: 2849-3601 bp Feature: domain Description: SpoIIIAH Location: 2870-3458 bp Feature: domain Description: SpoIIIAH Location: 2870-345 8 bp Feature: gene Location: 3612-3872 bp Feature: domain Description: spore_III_AG Location: 3627-3735 bp Feature: domain Description: spore_III_AG Location: 3627-3735 bp Feature: domain Description: spore_III_AG Location: 3741-3870 bp Feature: domain Description: spore_III_AG Location: 3741-3870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SpoIIIAH (pfam12685), spore_III_AG (TIGR02830)

Seq: RPZG01000414.1 Blautia wexlerae isolate S07B.meta.bin_10 k141_61895, whole genome shotgun sequence (4054 bp)
Overview 1 RT 1: 126-3343 bp Neighborhood of RT #1 [126, 3366] RVT-GII GIIM InsQ Feature: gene Location: 126-356 bp Feature: gene Location: 358-1635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571-1186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571-1186 bp Feature: domain Description: GIIM Note: maturase Location: 1252-1474 bp Feature: domain Description: GIIM Note: maturase Location: 1252-1474 bp Feature: gene Location: 1829-1978 bp Feature: gene Location: 2263-3366 bp Feature: domain Description: InsQ Location: 2272-3343 bp Feature: domain Description: InsQ Location: 2272-3343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsQ (COG0675)

Seq: RPZG01000207.1 Blautia wexlerae isolate S07B.meta.bin_10 k141_72278, whole genome shotgun sequence (4840 bp)
Overview 1 RT 1: 1-3553 bp Neighborhood of RT #1 [1, 3615] Clp_N RVT-GII GIIM Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Feature: gene Location: 1-147 bp Feature: domain Description: Clp_N Location: 58-145 bp Feature: domain Description: Clp_N Location: 58-145 bp Feature: gene Location: 253-492 bp Feature: gene Location: 580-1209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592-847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592-847 bp Feature: domain Description: GIIM Note: maturase Location: 910-1120 bp Feature: domain Description: GIIM Note: maturase Location: 910-1120 bp Feature: gene Location: 1404-2639 bp Feature: domain Description: Phage_int_SAM_1 Location: 1758-1980 bp Feature: domain Description: Phage_int_SAM_1 Location: 17 58-1980 bp Feature: domain Description: INT_RitA_C_like Location: 2073-2613 bp Feature: domain Description: INT_RitA_C_like Location: 207 3-2613 bp Feature: gene Location: 2632-3615 bp Feature: domain Description: INT_RitB_C_like Location: 2968-3553 bp Feature: domain Description: INT_RitB_C_like Location: 2968-3553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Clp_N (pfam02861), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797)

Seq: RPZG01000211.1 Blautia wexlerae isolate S07B.meta.bin_10 k141_77758, whole genome shotgun sequence (9282 bp)
Overview 1 RT 1: 50-3271 bp Neighborhood of RT #1 [50, 3672] YkfC RVT-GII PRK10572 PRK10572 LacZ Feature: gene Location: 50-337 bp Feature: gene Location: 354-845 bp Feature: domain Description: YkfC Location: 495-630 bp Feature: domain Description: YkfC Location: 495-630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651-837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651-8 37 bp Feature: gene Location: 965-1807 bp Feature: domain Description: PRK10572 Location: 1121-1256 bp Feature: domain Description: PRK10572 Location: 1121-1256 bp Feature: domain Description: PRK10572 Location: 1457-1781 bp Feature: domain Description: PRK10572 Location: 1457-178 1 bp Feature: gene Location: 1954-3672 bp Feature: domain Description: LacZ Location: 2005-3271 bp Feature: domain Description: LacZ Location: 2005-3271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-GII, PRK10572 (arabinose operon transcriptional regulator AraC), LacZ (COG3250)