myRT

myRT report for GCA_008662295.1_ASM866229v1

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Seq: RPZC01000021.1 Fusicatenibacter saccharivorans isolate S07A.meta.bin_4 k141_28704, whole genome shotgun sequence (26605 bp)
Overview 1 RT 1: 19033-23323 bp Neighborhood of RT #1 [19033, 23571] BaeS RVT-GII GIIM AAAA HTH_23 Feature: gene Location: 19033-19215 bp Feature: gene Location: 19021-20193 bp Feature: domain Description: BaeS Location: 19282-20185 bp Feature: domain Description: BaeS Location: 1 9282-201 85 bp Feature: gene Location: 20716-21279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20722-20923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20722-20923 bp Feature: domain Description: GIIM Note: maturase Location: 20983-21208 bp Feature: domain Description: GIIM Note: maturase Location: 20983-21 208 bp Feature: gene Location: 21507-22904 bp Feature: domain Description: AAAA Location: 21516-22734 bp Feature: domain Description: AAAA Location: 21 51 6-22734 bp Feature: gene Location: 23161-23571 bp Feature: domain Description: HTH_23 Location: 23194-23323 bp Feature: domain Description: HTH_23 Location: 231 94-23323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), RVT-GII, GIIM (pfam08388), AAAA (COG1672), HTH_23 (pfam13384)

Seq: RPZC01000026.1 Fusicatenibacter saccharivorans isolate S07A.meta.bin_4 k141_40586, whole genome shotgun sequence (4124 bp)
Overview 1 RT 1: 2-4023 bp Neighborhood of RT #1 [2, 4121] T4SS-DNA_transf T4SS-DNA_transf RVT-GII TraG-D_C Feature: gene Location: 2-523 bp Feature: domain Description: T4SS-DNA_transf Location: 80-209 bp Feature: domain Description: T4SS-DNA_transf Location: 80-2 09 bp Feature: domain Description: T4SS-DNA_transf Location: 296-458 bp Feature: domain Description: T4SS-DNA_transf Location: 2 96-458 bp Feature: gene Location: 1149-3059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1479-2223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1479-2 2 2 3 bp Feature: gene Location: 3083-3238 bp Feature: gene Location: 3246-4121 bp Feature: domain Description: TraG-D_C Location: 3669-4023 bp Feature: domain Description: TraG-D_C Location: 3669-402 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, T4SS-DNA_transf (pfam02534), TraG-D_C (pfam12696)

Seq: RPZC01000093.1 Fusicatenibacter saccharivorans isolate S07A.meta.bin_4 k141_50750, whole genome shotgun sequence (5285 bp)
Overview 1 RT 1: 3-5284 bp Neighborhood of RT #1 [3, 5283] DUF3801 VirD4 RVT-GII TraG-D_C Maff2 Feature: gene Location: 3-494 bp Feature: domain Description: DUF3801 Location: 102-465 bp Feature: domain Description: DUF3 801 Location: 102-465 bp Feature: gene Location: 614-1267 bp Feature: domain Description: VirD4 Location: 731-1229 bp Feature: domain Description: VirD4 Location: 73 1-1229 bp Feature: gene Location: 1926-3833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2256-3000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2256-3 000 bp Feature: gene Location: 3980-5065 bp Feature: domain Description: TraG-D_C Location: 4445-4802 bp Feature: domain Description: TraG-D_C Location: 4445-4802 bp Feature: gene Location: 5155-5283 bp Feature: domain Description: Maff2 Location: 5158-5284 bp Feature: domain Description: Maff2 Location: 5158-5284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF3801 (pfam12687), Maff2 (pfam12750), VirD4 (COG3505)