myRT

myRT report for GCA_008667815.1_ASM866781v1

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Seq: RQDJ01000013.1 Roseburia faecis isolate S11A.meta.bin_13 k141_104470, whole genome shotgun sequence (17362 bp)
Overview 1 RT 1: 3737-6990 bp Neighborhood of RT #1 [3737, 7025] RpoE RVT-GII GIIM Fur Feature: gene Location: 3737-4306 bp Feature: domain Description: RpoE Location: 3809-4301 bp Feature: domain Description: RpoE Location: 3809-4301 bp Feature: gene Location: 4506-4814 bp Feature: gene Location: 4922-6226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5123-5741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 23-5741 bp Feature: domain Description: GIIM Note: maturase Location: 5795-6011 bp Feature: domain Description: GIIM Note: maturase Location: 5795-601 1 bp Feature: gene Location: 6583-6720 bp Feature: gene Location: 6780-7025 bp Feature: domain Description: Fur Location: 6786-6990 bp Feature: domain Description: Fur Location: 6786-6990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoE (COG3343), RVT-GII, GIIM (pfam08388), Fur (COG0735)

Seq: RQDJ01000271.1 Roseburia faecis isolate S11A.meta.bin_13 k141_37380, whole genome shotgun sequence (3618 bp)
Overview 1 RT 1: 2-3615 bp Neighborhood of RT #1 [2, 3615] COG4646 HepA RVT_N RVT-GII YkfC Feature: gene Location: 2-955 bp Feature: domain Description: COG4646 Location: 5-458 bp Feature: domain Description: COG4646 Location: 5-458 bp Feature: domain Description: HepA Location: 800-932 bp Feature: domain Description: HepA Location: 800-932 bp Feature: gene Location: 1534-3204 bp Feature: RT Description: RVT_N Location: 1579-1822 bp Feature: RT Description: RVT_N Location: 1579-182 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1867-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1867-2 515 bp Feature: domain Description: YkfC Location: 2623-2818 bp Feature: domain Description: YkfC Location: 2 62 3-2 818 bp Feature: gene Location: 3205-3615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), COG4646 (Adenine-specific DNA methylase, N12 class ), HepA (COG0553)

Seq: RQDJ01000109.1 Roseburia faecis isolate S11A.meta.bin_13 k141_76277, whole genome shotgun sequence (4151 bp)
Overview 1 RT 1: 1-2589 bp Neighborhood of RT #1 [1, 3080] RVT-GII GIIM HsdM_N HsdM Feature: gene Location: 1-756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-298 bp Feature: domain Description: GIIM Note: maturase Location: 358-583 bp Feature: domain Description: GIIM Note: maturase Location: 3 58-583 bp Feature: gene Location: 993-1463 bp Feature: domain Description: HsdM_N Location: 1065-1446 bp Feature: domain Description: HsdM_N Location: 1065-1446 bp Feature: gene Location: 1491-3080 bp Feature: domain Description: HsdM Location: 1494-2589 bp Feature: domain Description: HsdM Location: 1494-2589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-GII, GIIM (pfam08388), HsdM_N (pfam12161)