myRT

myRT report for GCA_008668255.1_ASM866825v1

Download annotations/find similar RTs

Seq: RQCN01000420.1 Blautia wexlerae isolate S10B.meta.bin_10 k141_113704, whole genome shotgun sequence (3741 bp)
Overview 1 RT 1: 1155-3119 bp Neighborhood of RT #1 [1155, 3469] Acetyltransf_1 RVT-GII Feature: gene Location: 1155-1676 bp Feature: domain Description: Acetyltransf_1 Location: 1281-1596 bp Feature: domain Description: Acetyltransf_1 Location: 1 281 -1 596 bp Feature: gene Location: 1839-2084 bp Feature: gene Location: 2174-3469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2429-3119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2429-31 1 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII

Seq: RQCN01000172.1 Blautia wexlerae isolate S10B.meta.bin_10 k141_20890, whole genome shotgun sequence (8686 bp)
Overview 1 RT 1: 1-3757 bp Neighborhood of RT #1 [1, 3795] RVT-GII VirD4 VirD4 Feature: gene Location: 1-180 bp Feature: gene Location: 327-2234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 657-1401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 657-1401 bp Feature: gene Location: 2257-2502 bp Feature: gene Location: 2893-3795 bp Feature: domain Description: VirD4 Location: 3151-3508 bp Feature: domain Description: VirD4 Location: 3151-3508 bp Feature: domain Description: VirD4 Location: 3586-3757 bp Feature: domain Description: VirD4 Location: 3586-3757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII

Seq: RQCN01000085.1 Blautia wexlerae isolate S10B.meta.bin_10 k141_34149, whole genome shotgun sequence (4738 bp)
Overview 1 RT 1: 563-2737 bp Neighborhood of RT #1 [563, 2737] RVT-GII GIIM Feature: gene Location: 563-757 bp Feature: gene Location: 849-2138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1140-1773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1140-1773 bp Feature: domain Description: GIIM Note: maturase Location: 1857-2079 bp Feature: domain Description: GIIM Note: maturase Location: 1857-2079 bp Feature: gene Location: 2355-2483 bp Feature: gene Location: 2522-2737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RQCN01000236.1 Blautia wexlerae isolate S10B.meta.bin_10 k141_42666, whole genome shotgun sequence (3731 bp)
Overview 1 RT 1: 228-3578 bp Neighborhood of RT #1 [228, 3730] AAA_10 RVT_N RVT-GII GIIM TraC-F-type Feature: gene Location: 228-554 bp Feature: domain Description: AAA_10 Location: 390-537 bp Feature: domain Description: AAA_10 Location: 390-537 bp Feature: gene Location: 788-961 bp Feature: gene Location: 1081-2763 bp Feature: RT Description: RVT_N Location: 1159-1402 bp Feature: RT Description: RVT_N Location: 1159-14 02 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1447-2110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 4 7-2110 bp Feature: domain Description: GIIM Note: maturase Location: 2161-2398 bp Feature: domain Description: GIIM Note: maturase Location: 2161-2398 bp Feature: gene Location: 2768-3730 bp Feature: domain Description: TraC-F-type Location: 2852-3578 bp Feature: domain Description: TraC-F-type Location: 2852-3578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), AAA_10 (pfam12846)

Seq: RQCN01000155.1 Blautia wexlerae isolate S10B.meta.bin_10 k141_62288, whole genome shotgun sequence (6701 bp)
Overview 1 RT 1: 3703-6521 bp Neighborhood of RT #1 [3703, 6521] XRE DUF3169 RVT-GII GIIM Feature: gene Location: 3703-3921 bp Feature: domain Description: XRE Location: 3718-3907 bp Feature: domain Description: XRE Location: 3718-3907 bp Feature: gene Location: 3911-4699 bp Feature: domain Description: DUF3169 Location: 3941-4673 bp Feature: domain Description: DUF3169 Location: 3941-4673 bp Feature: gene Location: 4861-6273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5212-5833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 212-5 833 bp Feature: domain Description: GIIM Note: maturase Location: 5884-6094 bp Feature: domain Description: GIIM Note: maturase Location: 5 884-6094 bp Feature: gene Location: 6279-6521 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XRE (COG1476), DUF3169 (pfam11368), RVT-GII, GIIM (pfam08388)